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Posts by ravila
... I have heard about 'reverse' blast searches, such as using RPS-BLAST. According to the website, > RPS-BLAST (Reverse PSI-BLAST) searches a query sequence against a > database of profiles. This is the opposite of PSI-BLAST that > searches a profile against a database of sequences, henc ...
... Thanks! That solved the issue. ...
... I am trying to create a BLAST database with protein chain sequences. My FASTA looks like this: >1fig_1 ENVLTQSPAIMSASPGEKVTMACRASSSVSSTYLHWYQQKSGASPKLLIYSTSNLASGVP ARFSGS >1p8v_2 EADCGLRPLFEKKSLEDKTERELLESYID >5ivx_13 MSHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENP ...
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