User: rmferreira1994

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Posts by rmferreira1994

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qsea - genomic annotation
... I have performed and DNA methylation analysis of MeDIP-seq data with the QSEA package for bioconductor. In the final step I obtained the differentially methylated genomic windows. However, I have not been able to properly characterize each window(geneID, promoter, TSS, etc.). Does anyone know how to ...
chip-seq written 10 months ago by rmferreira199410
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Comment: C: qsea bioconductor - createQseaSet
... Thank you for the reply. I created an R project in which the directory is the paste were the bam files are ...
written 11 months ago by rmferreira199410
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qsea bioconductor - createQseaSet
... I have recently started to work with the "qsea" package in r for differential methylation analysis between two groups with data derived from MeDIP-seq. I input my bam files and created a data.frame("dataframe") accordingly, example: sample_name file_name group A1 " ...
chip-seq written 11 months ago by rmferreira199410 • updated 11 months ago by ATpoint36k

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