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Posts by Riri
... Hi Manuel, Thank you for your response. I tried using tabular.txt to filter, but it is missing my Sample IDs that are present in the corresponding VCF file, so it is not very helpful. The VCF file I have is around 95 GB and it has 1048 samples. Is it normal for tabular.txt to not have Sample IDs? ...
... Hello Everyone, I am fairly novice Bioinformatician. I need some help and suggestions on tools that I can use to subset my annotated vcf file using specific criteria. The criteria are: (i) Coding and Splice site variants (ii) CADD > 10 if nonsynonymous SNPs (iii) AA change: Nonsense (iv) Absent ...
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