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Posts by 47lesky
... Hi Eric, I kind of had a similar problem. When using `cnvkit.py coverage sample.bam antitarget.bed -o sample.antitargetcoverage.cnn`, I got summary like this: Time: 14.480 seconds (0 reads/sec, 3945 bins/sec) Summary: #bins=57119, #reads=0, mean=0.0000, min=0.0, max=0.0 Percent reads in regions ...
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