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Comment: Comment: Python table data extraction
updated 12 months ago by 43k • written 20 months ago by • 0
0
votes
5
replies
855
views
Python table data extraction
python
updated 12 months ago by 43k • written 20 months ago by • 0
3
votes
2
replies
577
views
Assembly or alignment?
sequencing reads assembly alignment
updated 21 months ago by 6.3k • written 21 months ago by • 0
0
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0
replies
514
views
Comment: Comment: SV on single-end data
23 months ago by deniselavezzari • 0
1
vote
2
replies
514
views
SV on single-end data
sequencing variant calling
23 months ago by deniselavezzari • 0
2
votes
3
replies
664
views
How to interpret flagstat output
sequencing reads
updated 23 months ago by 100k • written 23 months ago by • 0
0
votes
1
reply
664
views
Comment: Comment: How to interpret flagstat output
23 months ago by deniselavezzari • 0
0
votes
0
replies
465
views
ION TORRENT data alignment
alignment torrent sequencing ion
23 months ago by deniselavezzari • 0
0
votes
0
replies
381
views
GATK minimum frequency to call variant
calling gatk exome variant
2.2 years ago by deniselavezzari • 0
0
votes
0
replies
735
views
Fold80 Penalty value vs PCT > 0.2*mean
NGS metrics
2.4 years ago by deniselavezzari • 0
0
votes
0
replies
547
views
Tabix position and alternative allele
alternative allele tabix variants
2.5 years ago by deniselavezzari • 0
0
votes
0
replies
743
views
Comment: C: Supplementary aligments in VAF
3.2 years ago by deniselavezzari • 0
0
votes
3
replies
743
views
Supplementary aligments in VAF
alignment sequencing genome snp frequency
3.2 years ago by deniselavezzari • 0
0
votes
2
replies
806
views
SNP index definition
sequencing next-gen alignment
updated 3.3 years ago by ▴ 800 • written 3.3 years ago by • 0
0
votes
0
replies
721
views
Best way to deal with chimeric reads?
sequencing alignment Illumina Short-reads chimera
3.4 years ago by deniselavezzari • 0
0
votes
1
reply
754
views
Comment: C: Multiple VCF filtering
3.8 years ago by deniselavezzari • 0
2
votes
3
replies
754
views
Multiple VCF filtering
exom illumina wgs vcf
updated 3.8 years ago by 43k • written 3.8 years ago by • 0
0
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0
replies
3.0k
views
Comment: C: How to take in consideration UMI in WES pipeline?
4.0 years ago by deniselavezzari • 0
2
votes
2
replies
831
views
VCF comparison: shared variants
snp sequencing SNP genome
updated 4.0 years ago by 20 • written 4.2 years ago by • 0
1
vote
1
reply
1.6k
views
How to analyze DNA data with UMI
next-gen-sequencing umi
updated 10 months ago by 43k • written 4.1 years ago by • 0
0
votes
0
replies
950
views
BWA MEM paramenter
alignment sequencing
updated 10 months ago by 43k • written 4.2 years ago by • 0
0
votes
0
replies
1.0k
views
Comment: C: Create a gold standard
4.7 years ago by deniselavezzari • 0
3
votes
3
replies
1.0k
views
Create a gold standard
genome
4.7 years ago by deniselavezzari • 0
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