User: rchapari

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rchapari0
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Posts by rchapari

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Comment: C: SPARTA (RNA-seq) workflow issue
... Also, I added `verbose` but it did not add any additional text to the error messages ...
written 7 months ago by rchapari0
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Comment: C: SPARTA (RNA-seq) workflow issue
... To execute sparta.py? Following the tutorial, I execute the program using `python SPARTA.py` ...
written 7 months ago by rchapari0
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Comment: C: SPARTA (RNA-seq) workflow issue
... I'm looking through their scripts for the `file` parameter but have not found it yet ...
written 7 months ago by rchapari0
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Comment: C: SPARTA (RNA-seq) workflow issue
... Thank you for the feedback! I have tried both ways, zipped and unzipped, with no avail :( ...
written 7 months ago by rchapari0
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SPARTA (RNA-seq) workflow issue
... Hello, I am a bioinformatics novice and am trying to learn how to analyze my RNA-seq reads. I came across this program called [SPARTA][1] (**S**imple **P**rogram for **A**utomated reference-based bacterial **R**NA-seq **T**ranscriptome **A**nalysis) which is designed for novices like myself. The pr ...
sparta rna-seq python written 7 months ago by rchapari0 • updated 7 months ago by swbarnes27.5k

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