User: noshadho

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noshadho0
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Posts by noshadho

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GISTIC 2.0 markers
... Hi all, I am using GISTIC2.0 for a segmented file I have (Segmented using CBS). I can't understand what is marker file. What does a marker represent here? how dp we choose markers? Thanks ...
gistic marker cnv segmentation bioinformatics written 5 days ago by noshadho0 • updated 1 day ago by Kevin Blighe48k
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Recurrent CNV analysis
... Hello everyone, I am working on WGS data, and I am interested to do some copy number analysis. Particularly, I am looking to see what regions of genome has been applified (or deleted) recurrently in a specific cancer cohort. I know there is a tool for this called GISTIC 2.0, but it has been develop ...
gistic gene copy number variation cnv written 11 days ago by noshadho0 • updated 11 days ago by Kevin Blighe48k

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