User: a.j.wilson0000

Reputation:
10
Status:
New User
Location:
Last seen:
2 weeks ago
Joined:
1 month ago
Email:
a*************@gmail.com

Posts by a.j.wilson0000

<prev • 2 results • page 1 of 1 • next >
0
votes
1
answer
162
views
1
answers
Comment: C: GATK Terra Best Practices pipeline for Mito Variant Calling
... I'm fairly certain it's all been sorted on the lab side. We have new TWIST mito probes custom tailored to the rCRF that can pull out chrM piecemeal without disrupting the standard WES process. Auto filtering of amplified NuMTs is apparently done with FilterMutectCalls along with the default setting ...
written 4 weeks ago by a.j.wilson000010
3
votes
1
answer
162
views
1
answer
GATK Terra Best Practices pipeline for Mito Variant Calling
... Hey all. Currently working on a project to do mitochondrial variant calling on whole exome data. Our probes are about 120 bp and are setup to capture the entirety of the chrM contig at extremely high depth. We're currently looking at a few different tools, and the new GATK best practices MUTECT2 m ...
terra gatk wes variant calling written 4 weeks ago by a.j.wilson000010 • updated 4 weeks ago by Jeremy Leipzig18k

Latest awards to a.j.wilson0000

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2144 users visited in the last hour