User: VictoriaP

gravatar for VictoriaP
VictoriaP0
Reputation:
0
Status:
New User
Last seen:
3 months, 1 week ago
Joined:
10 months, 2 weeks ago
Email:
p**************@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by VictoriaP

<prev • 5 results • page 1 of 1 • next >
0
votes
1
answer
251
views
1
answers
Comment: C: How can I make a BED file from a VCF file?
... Thanks, I finally managed it. I needed to make a single BED file with all of the HERV viral insertion points identified from all of the 60+ files. ... Now to figure out how to properly use `bedtools closest`. ...
written 3 months ago by VictoriaP0
0
votes
1
answer
251
views
1
answers
Comment: C: How can I make a BED file from a VCF file?
... Thank you! This site was really helpful! ...
written 3 months ago by VictoriaP0
0
votes
1
answer
153
views
1
answers
Comment: C: API for searching for adjacent genes
... Do you know how to create a BED file from a VCF file? - I have multiple vcf files with viral insertion data, that I need to use to make a BED file to then use with bedtools as you previously suggested. ...
written 3 months ago by VictoriaP0
3
votes
1
answer
251
views
1
answer
How can I make a BED file from a VCF file?
... I have ~60 .vcf files with multiple viral insertion data. I need to create a bed file from these to use with bedtools. How do I create a BED file from a VCF file/multiple VCF files? ...
bedtools bed files written 3 months ago by VictoriaP0 • updated 3 months ago by Brice Sarver3.5k
1
vote
1
answer
153
views
1
answer
API for searching for adjacent genes
... Hi, is anyone able to advise whether there is an API available to find adjacent upstream or downstream genes from a given gene location? I am looking at viral insertions in the human genome, and once I've identified the viral insertion points, I need to identify what genes are in the flanking regio ...
genome gene alignment sequencing written 10 months ago by VictoriaP0 • updated 10 months ago by WouterDeCoster44k

Latest awards to VictoriaP

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1369 users visited in the last hour