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550
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GATK-Pathseq validation
gatk
updated 12 weeks ago by 43k • written 13 months ago by ▴ 10
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0
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446
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Comment: Comment: Deseq2 5 level condition - building contrast
4 months ago by annaA ▴ 10
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2
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446
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Comment: Comment: Deseq2 5 level condition - building contrast
4 months ago by annaA ▴ 10
1
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4
replies
446
views
Deseq2 5 level condition - building contrast
rna-seq deseq2
updated 4 months ago by 81k • written 4 months ago by ▴ 10
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0
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683
views
Comment: Comment: BLAST: Cobmine nr/nt database with a fasta file
11 months ago by annaA ▴ 10
1
vote
2
replies
683
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BLAST: Cobmine nr/nt database with a fasta file
blast blast_aliastool
updated 9 months ago by 43k • written 11 months ago by ▴ 10
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0
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508
views
Comment: Comment: Read counts by coordinates-Chromosome
22 months ago by annaA ▴ 10
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2
replies
508
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Read counts by coordinates-Chromosome
RNAseq
updated 22 months ago by 141k • written 22 months ago by ▴ 10
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0
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407
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extract gene sequence from multiple bam files in order to do Ka/Ks test
BAM ka-ks RNA-seq
updated 13 months ago by 43k • written 2.5 years ago by ▴ 10
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1
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1.4k
views
Comment: C: Filter count matrix -with replicates -based on variance
3.1 years ago by annaA ▴ 10
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0
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729
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is Generalized Additive Model appropriate for my data?
GAM Generalized-additive-models models statistics
3.1 years ago by annaA ▴ 10
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3
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1.4k
views
Filter count matrix -with replicates -based on variance
filter RNA-Seq count-matrix
3.1 years ago by annaA ▴ 10
6
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6
replies
6.4k
views
TPM or FPKM for single cell RNA seq experiment ?
RNA-Seq next-gen gene
updated 3.4 years ago by 20 • written 4.5 years ago by ▴ 10
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0
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3.2k
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Comment: A: Perform two-way ANOSIM in R
3.6 years ago by annaA ▴ 10
0
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1
reply
3.9k
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Comment: C: merge samples in phyloseq returns NAs
3.8 years ago by annaA ▴ 10
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1
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3.9k
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Comment: C: merge samples in phyloseq returns NAs
3.8 years ago by annaA ▴ 10
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0
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3.9k
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Comment: C: merge samples in phyloseq returns NAs
3.8 years ago by annaA ▴ 10
0
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2
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3.9k
views
Comment: A: merge samples in phyloseq returns NAs
3.8 years ago by annaA ▴ 10
1
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11
replies
3.9k
views
merge samples in phyloseq returns NAs
R phyloseq biom
updated 17 months ago by • 0 • written 3.8 years ago by ▴ 10
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2
replies
2.5k
views
filter OTU table based on absolute abundance
metabarcoding microbiome OTU
updated 3.8 years ago by 3.2k • written 3.8 years ago by ▴ 10
0
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0
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898
views
Comment: C: erros in dowloading SRA data
3.8 years ago by annaA ▴ 10
0
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2
replies
898
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erros in dowloading SRA data
SRA
updated 3.8 years ago by 81k • written 3.8 years ago by ▴ 10
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1
reply
727
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Comment: C: low mappability of scRNA data
3.9 years ago by annaA ▴ 10
0
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3
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727
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low mappability of scRNA data
RNA-Seq scRNA-seq sequencing mapping
updated 3.9 years ago by 81k • written 3.9 years ago by ▴ 10
0
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4
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800
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mapping quality scRNA seq
mapping single-cell-RNA RNA-Seq
updated 10 months ago by 43k • written 3.9 years ago by ▴ 10
0
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0
replies
800
views
Comment: C: mapping quality scRNA seq
3.9 years ago by annaA ▴ 10
0
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1
reply
800
views
Comment: A: mapping quality scRNA seq
3.9 years ago by annaA ▴ 10
0
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1
reply
783
views
detecting UMIs barcodes
RNA-Seq sequencing UMIs
4.0 years ago by annaA ▴ 10
0
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1
reply
1.9k
views
Comment: C: filtering unmapped and multiple mapped reads
4.0 years ago by annaA ▴ 10
0
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3
replies
1.9k
views
filtering unmapped and multiple mapped reads
smatools filtering RNA-Seq
4.0 years ago by annaA ▴ 10
0
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0
replies
1.2k
views
Comment: C: ucsc ids conversion
4.1 years ago by annaA ▴ 10
0
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0
replies
1.2k
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Comment: C: ucsc ids conversion
4.1 years ago by annaA ▴ 10
4
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6
replies
1.2k
views
ucsc ids conversion
ucsc genecode conversion ensamble
updated 4.1 years ago by ▴ 50 • written 4.1 years ago by ▴ 10
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0
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889
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Comment: C: long non coding RNAs annotation file
4.2 years ago by annaA ▴ 10
0
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0
replies
889
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Comment: C: long non coding RNAs annotation file
4.2 years ago by annaA ▴ 10
0
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0
replies
889
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Comment: C: long non coding RNAs annotation file
4.2 years ago by annaA ▴ 10
0
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5
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889
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long non coding RNAs annotation file
RNA-Seq
updated 4.2 years ago by ▴ 20 • written 4.2 years ago by ▴ 10
0
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0
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519
views
wTO.Complete arguments / biological replicates
wTO RNA-Seq
4.4 years ago by annaA ▴ 10
0
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1
reply
6.4k
views
Comment: A: TPM or FPKM for single cell RNA seq experiment ?
4.5 years ago by annaA ▴ 10
39 results • Page 1 of 1
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