User: sh.o.94

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sh.o.940
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Posts by sh.o.94

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Comment: C: Similar packages WGCNA package
... tanx a lot for your help ...
written 28 days ago by sh.o.940
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Error in goodSamplesGenes function
... Hi Dear I'm using WGCNA package to build a co-regulation network from my microarray data. I'm following the WGCNA tutorial but I have a error message when I try to run the goodSamplesGenes. Could anyone help me? gsg = goodSamplesGenes((datExpr), verbose = 3); Flagging genes and sample ...
wgcna R written 28 days ago by sh.o.940 • updated 11 days ago by annape930
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Similar packages WGCNA package
... Hello evry body, i need help i have a list of DEG then i want to investigate the relationships between gene groups and identify hub genes.i used WGCNA package but i want to use another package,is there any package about this? ...
wgcna package modules hub genes written 28 days ago by sh.o.940 • updated 28 days ago by Kevin Blighe54k
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Comment: C: normalization of Agilent data
... my data is micro array data, i used the limma package to normalize the data and run the struction of boxplot that shows data is normal then i inserted the R output into flex array. there showed the input data is not normal. ...
written 3 months ago by sh.o.940
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(Closed) normalization of Agilent data
... Hello evry body, We couldn’t input the Agilent data into the flex array. So we used R software for normalize the data, and then plot it in flex array but it didn’t work as well. Now I am wondering if we should use the same package for plotting as we used for data normalization!? we would be grateful ...
agilent R flex array written 3 months ago by sh.o.940 • updated 3 months ago by Biostar ♦♦ 20
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Microarray data with Agilent platform
... Hello every one I downloaded "series matrix file" Microarray with Agilent platform, there are some issues: 1.how should i know that this is one color/channel or two channel? 2.how can i make this data normal and analysis it? I would be grateful if you help me ...
agilent microarray written 4 months ago by sh.o.940

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