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Posts by brianna.flynn
... Hi Amar! I finally got it to work for me by downloading the accession2taxid file from the NCBI FTP site, and then creating a new blast database with the taxids using the option `-taxid_map` following this post: https://www.biostars.org/p/76551/ ...
... Hey all, I would like to get the scientific names of each of my blast hits from blastn run locally. I have downloaded the taxdb.tar.gz taxonomy database from NCBI and have set the $BLASTDB variable to the directory with my blast database and query contigs. In my tabbed output, all I get is an 'N/A ...
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