User: africys

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africys0
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Posts by africys

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Comment: C: Extract Allele At Particular Positions From Bam Files
... Note that this command generates some warnings with the latest version of samtools [warning] samtools mpileup option `-D` is functional, but deprecated. Please switch to `-t DP` in future. [warning] samtools mpileup option `-V` is functional, but deprecated. Please switch to `-t DV` in futu ...
written 3.0 years ago by africys0
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Simulating sanger sequence reads with mason
... I am trying to simulate sanger sequencing reads with mason. The idea is to used mason to generate random snps based on a provided error. Command mason sanger --read-length-error 0.1 test.fast I am not sure what I am doing wrong but i get this error message reference file: test.fasta Loading r ...
assembly simulation written 4.6 years ago by africys0 • updated 4.6 years ago by Brian Bushnell16k

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