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questions
1
vote
4
replies
2.7k
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bcftools filtering on INFO fields
variants
vcf
bcftools
variant
3.8 years ago by
Stephane Plaisance
▴ 460
0
votes
0
replies
602
views
how to best rotate a chloroplast plastid map
assembly
plastid
3.9 years ago by
Stephane Plaisance
▴ 460
0
votes
0
replies
1.1k
views
SNPEFF genome build with specific codon usage
SnpEff
variants
annotation
updated 3.9 years ago by
Biostar
20 • written 4.0 years ago by
Stephane Plaisance
▴ 460
0
votes
9
replies
1.1k
views
sequencing to identify novel restriction sites
sequencing
5.3 years ago by
Stephane Plaisance
▴ 460
4
votes
2
replies
4.4k
views
Merging And De-Duplicating Structural Variant Calls (Bedpe)
intersect
structural
updated 5.7 years ago by
Biostar
20 • written 12.8 years ago by
Stephane Plaisance
▴ 460
0
votes
5
replies
2.0k
views
create a track with mismatch density from a SAM/bam file
sam
bam
mismatch
6.2 years ago by
Stephane Plaisance
▴ 460
0
votes
1
reply
1.4k
views
bam-readcount does not accept Varscan native format for -l (feature request)
varscan2
6.5 years ago by
Stephane Plaisance
▴ 460
2
votes
5
replies
2.4k
views
How to Filter ENSembl to fetch more confident transcripts
ensembl
biomart
transcripts
updated 7.0 years ago by
Emily
23k • written 7.0 years ago by
Stephane Plaisance
▴ 460
2
votes
3
replies
1.7k
views
bioperl Bio::SeqIO join + complement weirdness
bioperl
7.1 years ago by
Stephane Plaisance
▴ 460
0
votes
1
reply
3.9k
views
Bedtools map end with warning about a 'leading zero' error
bedtools
updated 20 months ago by
Ram
43k • written 8.5 years ago by
Stephane Plaisance
▴ 460
41
votes
18
replies
9.6k
views
9 follow
Harvesting Known Disease Mutations
disease
mutation
variant
human
updated 9.2 years ago by
Biostar
20 • written 12.6 years ago by
Stephane Plaisance
▴ 460
4
votes
5
replies
3.0k
views
Mitochondrial Haplogroup Determination
updated 10.5 years ago by
Biostar
20 • written 12.2 years ago by
Stephane Plaisance
▴ 460
2
votes
1
reply
3.9k
views
Change Span Size In Wig And Generate New File
ucsc
wiggle
conversion
updated 13.0 years ago by
Sukhi Singh
11k • written 13.2 years ago by
Stephane Plaisance
▴ 460
4
votes
2
replies
2.4k
views
Can Substitutions Be Encoded In Vcf Format
vcf
genome
format
updated 13.2 years ago by
Laura
★ 1.8k • written 13.2 years ago by
Stephane Plaisance
▴ 460
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