User: Adriel Rosa

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Posts by Adriel Rosa

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Comment: C: Error: Could not find or load main class -Xmx4g
... thank you for help me ...
written 5 months ago by Adriel Rosa0
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Error: Could not find or load main class -Xmx4g
... Hello, I had some problem with gatk haplotypecaller, someone can help me? thats the error: Error: Could not find or load main class “-Xmx4g” my command: ./gatk --java-options “-Xmx4g” HaplotypeCaller -R /home/adriel-rosa/STARteste/referência/Oreochromis_niloticus.O_niloticus_UMD_NMBU.dn ...
haplotypecaller gatk xmx4g snp written 5 months ago by Adriel Rosa0 • updated 9 days ago by larryhems0
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How convert a fastQ file to a Sam/Bam file
... Hello, i need call some snps, and in the programs that i use will need the input file in .bam, but my files are in .fastq can someone help me? i use ubuntu os ...
bam sam snp convert written 7 months ago by Adriel Rosa0 • updated 5 months ago by Biostar ♦♦ 20
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Comment: C: Unknown trimmer, single end, i tried other solutions but not soved.
... i really love you, its work, thanks. S2 ...
written 9 months ago by Adriel Rosa0
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Comment: C: Unknown trimmer, single end, i tried other solutions but not soved.
... the path to archive ...
written 9 months ago by Adriel Rosa0
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Unknown trimmer, single end, i tried other solutions but not soved.
... Good afternoon, I"d like to know how to solve some software error in trimmomatic, "Unknown trimmer", i'd tried other solutions that i found in the forum. that's my code: $trimmomatic SE -threads 10 /../00-Fastq_analise/ T1R2_6H.fastq T1R2_6H_trimm ILLUMINACLIP:/software/bin/Trimmomatic-0.39/ ...
software error trimmomatic written 9 months ago by Adriel Rosa0 • updated 9 months ago by zx87549.6k

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