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2
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4.2k
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Answer: A: Most efficient way to convert Counts to RPKM
3.4 years ago by h.mon 35k
2
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1
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4.8k
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Answer: A: RNAseq RSEM and featurecounts
3.4 years ago by h.mon 35k
0
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0
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1.8k
views
Answer: A: bedtools sort and merge
3.4 years ago by h.mon 35k
1
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1
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1.6k
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Answer: A: Tools for hard trimming?
3.4 years ago by h.mon 35k
1
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1
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4.1k
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Answer: A: How to install Bioperl on Ubuntu 18.x
3.4 years ago by h.mon 35k
3
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1
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4.6k
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Answer: A: BWA mem skip orientation RF/RR as there are not enough pairs
3.5 years ago by h.mon 35k
0
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1
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1.9k
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Answer: A: Why did my bowtie option (--no-unal) not present in the help?
3.5 years ago by h.mon 35k
0
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1
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1.5k
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Answer: A: I have questions about importing fastq data from ENA to qiime2
3.5 years ago by h.mon 35k
1
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0
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1.0k
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Answer: A: How to have the count of reads mapping each transcript of a fasta file ?
3.5 years ago by h.mon 35k
1
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1
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1.6k
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Answer: A: Questions about the Getting-started of wtdbg2
3.5 years ago by h.mon 35k
3
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2
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1.8k
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Answer: C: FDR for multiple contrasts
3.5 years ago by h.mon 35k
2
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0
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952
views
Answer: A: How to distinguish selection vs population demography from Tajima's D test
3.5 years ago by h.mon 35k
2
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0
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799
views
Answer: A: SAM file annotation
3.5 years ago by h.mon 35k
0
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0
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466
views
Answer: C: which expression levels should I choose in microarray?
3.5 years ago by h.mon 35k
0
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1
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2.0k
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Answer: A: Blastdbcmd (Windows) - Too Many Positional Arguments
3.5 years ago by h.mon 35k
0
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0
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659
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Answer: A: To Translate transcriptome
3.5 years ago by h.mon 35k
1
vote
0
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788
views
Answer: A: Error installing MITE-Hunter
3.5 years ago by h.mon 35k
1
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1
reply
1.6k
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Answer: A: Use PCoA plot rather than phylogenetic tree?
3.5 years ago by h.mon 35k
0
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1
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596
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Answer: A: Program to plot 60,000 16S rRNA dataset for phylogenetic assessment?
3.5 years ago by h.mon 35k
2
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1
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3.2k
views
Answer: A: I have aligned reads and gene counts from STAR. How should I calculate TPM from
3.5 years ago by h.mon 35k
0
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1
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837
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Answer: A: Try to find a tool for creating a pipeline with PBS scripts?
3.5 years ago by h.mon 35k
1
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0
replies
1.4k
views
Answer: C: Count number of Genes in GFF3 file (Prokka output)
3.5 years ago by h.mon 35k
1
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0
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619
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Answer: A: Assembling Short Sequence
3.6 years ago by h.mon 35k
0
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0
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1.7k
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Answer: A: featureCounts returning counts of 0 for all gene_id
3.6 years ago by h.mon 35k
1
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1
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7.5k
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Answer: A: Using featureCounts on paired-end reads aligned with HISAT2 resulting in 0 assig
3.6 years ago by h.mon 35k
4
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1
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1.3k
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Answer: A: Losing most PE reads using Cutadapt on 150bp PE metagenomes
3.6 years ago by h.mon 35k
1
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1
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2.2k
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Answer: A: De novo transcriptome from PE reads with high multi-mapping rate (Bowtie2)
3.6 years ago by h.mon 35k
0
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1
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1.5k
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Answer: A: Using GNU Parallel to read arguments into a bash script
3.6 years ago by h.mon 35k
7
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0
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4.7k
views
Answer: A: [RNA-Seq] STAR vs Subread
3.6 years ago by h.mon 35k
0
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0
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1.6k
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Answer: A: IPA (Improved Phased Assembly) output questions
3.6 years ago by h.mon 35k
0
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1
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3.0k
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Answer: C: Normality test for rna seq data
3.6 years ago by h.mon 35k
3
votes
1
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1.5k
views
Answer: A: rnaQUAST-2.1.0/BUSCO, blast-2.10.0 multithreading problem?
3.6 years ago by h.mon 35k
6
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2
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4.4k
views
Answer: A: How to run STAR with multiple files
3.6 years ago by h.mon 35k
3
votes
0
replies
1.2k
views
Answer: A: How to deal with high duplication rate in FASTQC ( de novo transcriptom assembly
3.6 years ago by h.mon 35k
3
votes
1
reply
1.9k
views
Answer: C: Aligning thousands of genomes with Mugsy
3.6 years ago by h.mon 35k
4
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1
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1.9k
views
Answer: A: Metagenomic Data management
3.7 years ago by h.mon 35k
2
votes
1
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885
views
Answer: A: Ensembl reference genomes and annotations by chromosome only.
3.7 years ago by h.mon 35k
0
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1
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1.9k
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Answer: A: BWA aligning forward and reverse differently
3.7 years ago by h.mon 35k
6
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0
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3.2k
views
Answer: A: Why does bioinformatics use a special format like a BAM file instead of a databa
3.7 years ago by h.mon 35k
2
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0
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1.3k
views
Answer: A: Displaying the KEGG pathway image in R notebook
3.7 years ago by h.mon 35k
0
votes
0
replies
911
views
Answer: A: trying to set up bigSCale_seems cannot load in R 3.6.1, 3.6.3 or 4.02
3.7 years ago by h.mon 35k
3
votes
1
reply
1.1k
views
Answer: A: Hmmer scan eror
3.7 years ago by h.mon 35k
0
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0
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2.9k
views
Answer: A: a5 Miseq pipeline error
3.7 years ago by h.mon 35k
3
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0
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4.7k
views
Answer: A: BLAST masks repetitive sequences - but where: database or query sequence or both
3.7 years ago by h.mon 35k
0
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1
reply
2.0k
views
Answer: C: Concatenation and Gzip Compression of Beagle Files Slow
3.7 years ago by h.mon 35k
0
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0
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1.8k
views
Answer: A: Error in RGI-CARD database
3.7 years ago by h.mon 35k
1
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0
replies
2.0k
views
Answer: A: file and directory management best practices
3.7 years ago by h.mon 35k
0
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0
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1.1k
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Answer: A: Error related to DESeq2 package
3.7 years ago by h.mon 35k
2
votes
1
reply
881
views
Answer: A: What does "assembly-level" classification mean?
3.7 years ago by h.mon 35k
0
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0
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3.6k
views
Answer: A: How to remove gaps from sequence alignment?
3.7 years ago by h.mon 35k
1,599 results • Page 2 of 32
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