User: harshraje19
harshraje19 • 30
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- 30
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- 3 months, 2 weeks ago
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- 11 months, 1 week ago
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Posts by harshraje19
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... Hi Friends,
I am performing WGCNA in R. I am getting following error messages.
Can anyone help me out to solve this error?
Thanks
> dissTOM = 1-TOM
Error: vector memory exhausted (limit reached?)
> dissTOM = 1-TOM
Error: vector memory exhausted (limit reached?)
> d ...
written 3 months ago by
harshraje19 • 30
• updated
3 months ago by
Kevin Blighe ♦ 67k
0
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130
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... I have paired end data, i want to perform the SNP genotyping. Is it possible to use tassel 5 for that? Or should i opt for fastGBS.
anyone have suggestion about this?
Thank you
Harshraj ...
written 6 months ago by
harshraje19 • 30
0
votes
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166
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... I am performing the network analysis with WGCNA and at the very last step I have to export the network file in VisANT readable format in order to visualize the gene network in external software VisANT.
But the problem is whenever, I am exporting gene network from R version 3.6.1 the gene ids are re ...
written 6 months ago by
harshraje19 • 30
0
votes
2
answers
216
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2
answers
... I have many files with gene IDs. How to use perl API?
Is there any command? Can you please elaborate.
Thanks ...
written 7 months ago by
harshraje19 • 30
0
votes
2
answers
216
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2
answers
... After downloading the CDS file from ensembl plant web site, how to filter specific gene IDs? Is there any specific command. ...
written 7 months ago by
harshraje19 • 30
7
votes
2
answers
216
views
5 follow
2
answers
... Hello Everyone,
I hope everyone is in good health.
I want to convert ensembl gene ids to nucletide sequences?
Can anyone suggest me tool or software or command line in linux or R to do so?
I have follwoing IDs from plant Vitis Vinifera
VIT_00s0187g00200
VIT_00s0187g00250
VIT_00s0194g00310
VIT_00 ...
written 7 months ago by
harshraje19 • 30
• updated
7 months ago by
genomax ♦ 92k
0
votes
1
answer
896
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1
answers
... Yes. It is working for me.
Thank you very much
...
written 8 months ago by
harshraje19 • 30
0
votes
1
answer
896
views
1
answers
... Following error has found
he downloaded source packages are in
‘/tmp/Rtmp7SFM5k/downloaded_packages’
Installation path not writeable, unable to update packages: boot, class, foreign,
KernSmooth, lattice, MASS, Matrix, mgcv, nlme, nnet, survival
Warning messages:
1: In install.packages(...) :
i ...
written 8 months ago by
harshraje19 • 30
0
votes
1
answer
896
views
1
answers
... > install.packages("BiocManager") BiocManager::install("WGCNA")
Error: unexpected symbol in "install.packages("BiocManager") BiocManager" ...
written 8 months ago by
harshraje19 • 30
0
votes
1
answer
896
views
1
answers
... Hi Thank you for your suggestions. I tried but not working
...
written 8 months ago by
harshraje19 • 30
Latest awards to harshraje19
Scholar
8 months ago,
created an answer that has been accepted.
For A: Error in demultiplexing of GBS data using GBSX_v1.3.jar
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