User: harshraje19

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harshraje1930
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Posts by harshraje19

<prev • 44 results • page 1 of 5 • next >
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Error in WGCNA?
... Hi Friends, I am performing WGCNA in R. I am getting following error messages. Can anyone help me out to solve this error? Thanks > dissTOM = 1-TOM Error: vector memory exhausted (limit reached?) > dissTOM = 1-TOM Error: vector memory exhausted (limit reached?) > d ...
R rna-seq written 8 days ago by harshraje1930 • updated 8 days ago by Kevin Blighe63k
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Is it possible to use, TASSEL for paired end data?
... I have paired end data, i want to perform the SNP genotyping. Is it possible to use tassel 5 for that? Or should i opt for fastGBS. anyone have suggestion about this? Thank you Harshraj ...
snp sequencing written 11 weeks ago by harshraje1930
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Error in exporting Network to VisANT format
... I am performing the network analysis with WGCNA and at the very last step I have to export the network file in VisANT readable format in order to visualize the gene network in external software VisANT. But the problem is whenever, I am exporting gene network from R version 3.6.1 the gene ids are re ...
visant wgcna networktovisant coexpression written 3 months ago by harshraje1930
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Comment: C: How to convert ENSEMBL gene IDs to nucleotide sequences?
... I have many files with gene IDs. How to use perl API? Is there any command? Can you please elaborate. Thanks ...
written 4 months ago by harshraje1930
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Comment: C: How to convert ENSEMBL gene IDs to nucleotide sequences?
... After downloading the CDS file from ensembl plant web site, how to filter specific gene IDs? Is there any specific command. ...
written 4 months ago by harshraje1930
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How to convert ENSEMBL gene IDs to nucleotide sequences?
... Hello Everyone, I hope everyone is in good health. I want to convert ensembl gene ids to nucletide sequences? Can anyone suggest me tool or software or command line in linux or R to do so? I have follwoing IDs from plant Vitis Vinifera VIT_00s0187g00200 VIT_00s0187g00250 VIT_00s0194g00310 VIT_00 ...
gene assembly sequence rna-seq sequencing written 4 months ago by harshraje1930 • updated 4 months ago by genomax87k
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Comment: C: Error in WGCNA packages installation in R?
... Yes. It is working for me. Thank you very much ...
written 4 months ago by harshraje1930
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Comment: C: Error in WGCNA packages installation in R?
... Following error has found he downloaded source packages are in ‘/tmp/Rtmp7SFM5k/downloaded_packages’ Installation path not writeable, unable to update packages: boot, class, foreign, KernSmooth, lattice, MASS, Matrix, mgcv, nlme, nnet, survival Warning messages: 1: In install.packages(...) : i ...
written 4 months ago by harshraje1930
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Comment: C: Error in WGCNA packages installation in R?
... > install.packages("BiocManager") BiocManager::install("WGCNA") Error: unexpected symbol in "install.packages("BiocManager") BiocManager" ...
written 4 months ago by harshraje1930
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Comment: C: Error in WGCNA packages installation in R?
... Hi Thank you for your suggestions. I tried but not working ...
written 4 months ago by harshraje1930

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Scholar 4 months ago, created an answer that has been accepted. For A: Error in demultiplexing of GBS data using GBSX_v1.3.jar

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