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5
votes
3
replies
590
views
Strand bias in supplementary alignments from Nanopore
minimap2 nanopore strand
updated 5 months ago by ★ 3.8k • written 5 months ago by 14k
1
vote
3
replies
1.0k
views
How ensembl assigns parent GO terms and its consequence on GO analysis
gsea ensembl fgsea biomart go
updated 18 months ago by ▴ 350 • written 18 months ago by 14k
1
vote
1
reply
1.4k
views
blast: error while reading seqid using ncbi database
ncbi blast
21 months ago by dariober 14k
13
votes
10
replies
5.3k
views
Make bam index human readable
bam index bai
updated 20 months ago by 43k • written 8.3 years ago by 14k
8
votes
9
replies
5.3k
views
Corrupted bam file
samtools bwa bam
updated 2.3 years ago by 43k • written 9.7 years ago by 14k
5
votes
2
replies
1.1k
views
Mutate protein sequence according to HGVS
HGVS protein fasta
updated 4.8 years ago by 23k • written 4.8 years ago by 14k
2
votes
4
replies
2.7k
views
F-seq output: Meaning of bed columns
F-Seq fseq peak-calling
updated 2.3 years ago by 43k • written 9.6 years ago by 14k
15
votes
9
replies
2.9k
views
6 follow
Survey: What colour theme do you use in your terminal?
terminal color theme
updated 5.2 years ago by 11k • written 7.1 years ago by 14k
5
votes
4
replies
2.7k
views
Access array in bcftools
bcftools view expression
5.6 years ago by dariober 14k
1
vote
4
replies
1.3k
views
biostars.org: Search capped to 50 hits?
meta biostars
updated 13 months ago by 43k • written 7.1 years ago by 14k
7
votes
9
replies
2.6k
views
Java code for indexing fasta file
Java fasta index
7.3 years ago by dariober 14k
1
vote
3
replies
3.0k
views
Inconsistent GTF from UCSC browser vs genePredToGtf
GTF genePredToGtf UCSC
7.9 years ago by dariober 14k
2
votes
4
replies
2.4k
views
Corrupted tabix index?
tabix htsjdk java
updated 20 months ago by 43k • written 8.3 years ago by 14k
4
votes
7
replies
1.8k
views
Assessing diversity of random oligonucleotides
sequence kmer random oligonucleotides
updated 18 months ago by 43k • written 8.8 years ago by 14k
2
votes
6
replies
6.5k
views
Mark duplicates for single end reads: Why only 5'end?
Read duplicates MarkDuplicates 5' 3'end
9.0 years ago by dariober 14k
0
votes
1
reply
3.3k
views
Expected number of read duplicates
read duplication statistics
updated 9.3 years ago by 104k • written 9.3 years ago by 14k
12
votes
7
replies
13k
views
Add read group to header after samtools merge
samtools read-group merge
updated 2.1 years ago by 43k • written 9.3 years ago by 14k
10
votes
5
replies
6.0k
views
Are ENA and SRA archives in sync?
sra ena NGS
updated 2.2 years ago by 43k • written 9.4 years ago by 14k
49
votes
10
replies
45k
views
When and why is bwa aln better then bwa mem?
aln comparison bwa mem
updated 3.0 years ago by 43k • written 9.5 years ago by 14k
5
votes
7
replies
4.6k
views
markDuplicates: Histogram not produced
picard markDuplicates
updated 2.2 years ago by 43k • written 9.5 years ago by 14k
33
votes
14
replies
14k
views
11 follow
ChIP-Seq: Calling peaks with replicates
ChIP-Seq
updated 2.3 years ago by 43k • written 9.6 years ago by 14k
2
votes
2
replies
4.3k
views
Why "No real operator (M|I|D|N)" in picard?
picard cigar
updated 2.5 years ago by 43k • written 9.8 years ago by 14k
2
votes
2
replies
3.2k
views
Picard API: Modify sam header
Picard java
updated 2.6 years ago by 43k • written 9.9 years ago by 14k
0
votes
2
replies
2.7k
views
Java Samtools Api: Write Bam To Stdout
java picard samtools
updated 10.0 years ago by 161k • written 10.0 years ago by 14k
24 results • Page 1 of 1
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