Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : answers
0
votes
0
replies
495
views
Answer: Answer: CNV evaluate confidence
17 months ago by cmdcolin ★ 3.8k
1
vote
1
reply
892
views
Answer: Answer: Databases with Genes <-> Diseases relations
18 months ago by cmdcolin ★ 3.8k
1
vote
0
replies
2.3k
views
Answer: Answer: Tools to plot gene arrow diagram
18 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
563
views
Answer: Answer: Tool to detect small inversion in plastome
18 months ago by cmdcolin ★ 3.8k
0
votes
0
replies
1.6k
views
Answer: Answer: Tool for extracting part of aligned sequence by CIGAR string
18 months ago by cmdcolin ★ 3.8k
1
vote
2
replies
1.0k
views
Answer: Answer: Which VCF file to select for generating Multiple sequence alignment of a gene?
19 months ago by cmdcolin ★ 3.8k
1
vote
1
reply
2.2k
views
Answer: Answer: Tools to obtain sequence from bam file
19 months ago by cmdcolin ★ 3.8k
4
votes
1
reply
788
views
Answer: Answer: Chromosome pair numbers in variant annotation.
19 months ago by cmdcolin ★ 3.8k
2
votes
0
replies
1.4k
views
Answer: Answer: Copy Number Variation (CNV) visualizer
20 months ago by cmdcolin ★ 3.8k
1
vote
1
reply
1.8k
views
Answer: Answer: converting bedgraph to bigwig by not using ucsc tools
20 months ago by cmdcolin ★ 3.8k
2
votes
2
replies
3.0k
views
Answer: Answer: How to determine assembly of a VCF?
20 months ago by cmdcolin ★ 3.8k
1
vote
0
replies
575
views
Answer: Answer: Upload database of a tool
21 months ago by cmdcolin ★ 3.8k
0
votes
0
replies
583
views
Answer: Answer: Add species name to a multiple alignment format (MAF) file
21 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
2.6k
views
Answer: Answer: BCFtools consensus
21 months ago by cmdcolin ★ 3.8k
2
votes
1
reply
1.9k
views
Answer: Answer: Best resource for getting a person with a Math/Comp Sci background the right amo
21 months ago by cmdcolin ★ 3.8k
1
vote
0
replies
617
views
Answer: Answer: Graphing gene fusions
21 months ago by cmdcolin ★ 3.8k
2
votes
0
replies
1.1k
views
Answer: Answer: The nightmare of coordinate systems
21 months ago by cmdcolin ★ 3.8k
2
votes
0
replies
441
views
Answer: Answer: Duplicate chromosome location columns in a bed file makes problem in importing t
21 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
11k
views
Answer: Answer: Tabix With Gff3
22 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
1.4k
views
Answer: Answer: How can I find a DNA sequence that codes for a protein from a large FASTQ file?
23 months ago by cmdcolin ★ 3.8k
1
vote
0
replies
2.5k
views
Answer: Answer: Software to draw protein domains of proteins
23 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
1.8k
views
Answer: Answer: sliding windows over genome
23 months ago by cmdcolin ★ 3.8k
3
votes
1
reply
815
views
Answer: Answer: How can i insert a "remove duplicates" command in a samtools script?
23 months ago by cmdcolin ★ 3.8k
2
votes
0
replies
972
views
Answer: Answer: Using Tabix to download region of interest from eQTL catalogue
2.0 years ago by cmdcolin ★ 3.8k
1
vote
0
replies
1.7k
views
Answer: Answer: Change chromosome notation in bam file
2.1 years ago by cmdcolin ★ 3.8k
5
votes
1
reply
4.4k
views
Answer: Answer: Structural Variants (SV) Manta output interpretation: MantaBND and translocation
10 weeks ago by cmdcolin ★ 3.8k
0
votes
0
replies
672
views
Answer: Answer: Reads mapping
2.2 years ago by cmdcolin ★ 3.8k
1
vote
1
reply
1.2k
views
Answer: Answer: Uploading VCF track onto JBrowse 1.16.8
2.3 years ago by cmdcolin ★ 3.8k
1
vote
1
reply
648
views
Answer: Answer: how to find the expression of an inserted genes?
2.4 years ago by cmdcolin ★ 3.8k
3
votes
1
reply
4.3k
views
Answer: Answer: Genome Browser suggestions
2.5 years ago by cmdcolin ★ 3.8k
3
votes
0
replies
1.4k
views
Answer: Answer: Visualization tools for split read / structural variants
2.5 years ago by cmdcolin ★ 3.8k
1
vote
0
replies
973
views
Answer: Answer: Translating thinks like (c.2450-118A>G) to a position in IGV
2.5 years ago by cmdcolin ★ 3.8k
2
votes
2
replies
1.1k
views
Answer: Answer: Jbrowse reference sequence issue
2.5 years ago by cmdcolin ★ 3.8k
4
votes
1
reply
2.3k
views
Answer: Answer: Structural variant breakend
2.6 years ago by cmdcolin ★ 3.8k
2
votes
1
reply
1.5k
views
Answer: Answer: genome browser to check SNP genome build
2.6 years ago by cmdcolin ★ 3.8k
1
vote
1
reply
1.8k
views
Answer: Answer: How to infer segment direction from vcf
2.7 years ago by cmdcolin ★ 3.8k
2
votes
1
reply
2.7k
views
Answer: Answer: How to find tandem duplications pattern in a DNA sequence
3.0 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
899
views
Answer: A: Optimized genome browser
3.2 years ago by cmdcolin ★ 3.8k
3
votes
1
reply
2.9k
views
Answer: Answer: Jbrowse: importance of draw-basepair-track.pl
updated 2.1 years ago by 43k • written 9.3 years ago by ★ 3.8k
0
votes
0
replies
1.1k
views
Answer: A: Does 1000 genomes have a flat file with allele frequencies for each site anywher
3.6 years ago by cmdcolin ★ 3.8k
5
votes
0
replies
3.2k
views
Answer: A: Why does bioinformatics use a special format like a BAM file instead of a databa
3.7 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
6.8k
views
Answer: A: Merge two bigwig(+/- strand) files from RNA-seq
3.9 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
2.3k
views
Answer: A: How To Fetch Exon Sequence From Genomic Coordinates
4.2 years ago by cmdcolin ★ 3.8k
3
votes
1
reply
20k
views
Answer: A: Other Genomic Viewer Like Igv
4.3 years ago by cmdcolin ★ 3.8k
1
vote
1
reply
1.5k
views
Answer: A: Displaying structural variants with JBrowse
4.4 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
5.0k
views
Answer: A: Does anybody know how to do a local install of samtools on centos without using
4.5 years ago by cmdcolin ★ 3.8k
1
vote
2
replies
3.7k
views
Answer: A: Linking Jbrowse to Galaxy/Taverna
updated 4.5 years ago by 43k • written 9.4 years ago by ★ 3.8k
2
votes
0
replies
7.3k
views
Answer: A: Dbsnp132 1000Genomes Vcf File Info Field: Bitfield Structure
updated 4.6 years ago by 43k • written 9.7 years ago by ★ 3.8k
2
votes
2
replies
52k
views
Answer: Answer: How Can I Convert Bam/Sam To Wiggle
updated 13 months ago by 43k • written 10.2 years ago by ★ 3.8k
13
votes
2
replies
22k
views
Answer: A: Piping bowtie2 output directly into BAM
5.1 years ago by cmdcolin ★ 3.8k
151 results • Page 2 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6