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388
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Comment: Comment: Load a full GFF3 into annotation track using arrow (Apollo)
6 days ago by cmdcolin ★ 3.8k
1
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0
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317
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Comment: Comment: Best genome browser for manual curation of gene structure(s)?
13 days ago by cmdcolin ★ 3.8k
3
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1
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317
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Answer: Answer: Best genome browser for manual curation of gene structure(s)?
14 days ago by cmdcolin ★ 3.8k
0
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1
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485
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Answer: Answer: Is it possible to set different tracks to the same scale in JBrowse
14 days ago by cmdcolin ★ 3.8k
0
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0
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558
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Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
23 days ago by cmdcolin ★ 3.8k
0
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1
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558
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Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
23 days ago by cmdcolin ★ 3.8k
1
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1
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558
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Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
23 days ago by cmdcolin ★ 3.8k
1
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1
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558
views
Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
23 days ago by cmdcolin ★ 3.8k
1
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0
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279
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Comment: Comment: Forgot the web site with comparison of NGS platforms
25 days ago by cmdcolin ★ 3.8k
1
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1
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558
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Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
26 days ago by cmdcolin ★ 3.8k
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1
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272
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Comment: Comment: comparing VCF files
29 days ago by cmdcolin ★ 3.8k
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1.6k
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Comment: Comment: How to calculate coverage of Nanopore long read data?
6 weeks ago by cmdcolin ★ 3.8k
2
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0
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259
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Answer: Answer: gene alignment (microsynteny)
8 weeks ago by cmdcolin ★ 3.8k
0
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1
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586
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Answer: Answer: hg38 goldenPath cpgIsland is down?
11 weeks ago by cmdcolin ★ 3.8k
1
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1
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244
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Comment: Comment: How can I view the information in an alternative allele?
12 weeks ago by cmdcolin ★ 3.8k
2
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0
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351
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Answer: Answer: Impossible gene fusion annotations
12 weeks ago by cmdcolin ★ 3.8k
0
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0
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551
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Comment: Comment: How to visualize multiple bacterial genomes with circos?
3 months ago by cmdcolin ★ 3.8k
0
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1
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416
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Comment: Comment: Querying nr_clustered database using BLAST REST API?
3 months ago by cmdcolin ★ 3.8k
0
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1
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416
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Comment: Comment: Querying nr_clustered database using BLAST REST API?
3 months ago by cmdcolin ★ 3.8k
1
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5
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416
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Querying nr_clustered database using BLAST REST API?
blast clustered
updated 12 weeks ago by 141k • written 3 months ago by ★ 3.8k
0
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0
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2.9k
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Comment: Comment: How to get RID from blast rest api url using php
3 months ago by cmdcolin ★ 3.8k
0
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0
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443
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Answer: Answer: Bacterial Synteny Tools
3 months ago by cmdcolin ★ 3.8k
0
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1
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514
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Comment: Comment: How to draw genome atlas on Linux?
3 months ago by cmdcolin ★ 3.8k
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1
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514
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Comment: Comment: How to draw genome atlas on Linux?
3 months ago by cmdcolin ★ 3.8k
1
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2
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514
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Answer: Answer: How to draw genome atlas on Linux?
3 months ago by cmdcolin ★ 3.8k
1
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0
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937
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Comment: Comment: Where can I find a vcf file with individuals in it, that have a specific disease
3 months ago by cmdcolin ★ 3.8k
2
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1
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937
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Answer: Answer: Where can I find a vcf file with individuals in it, that have a specific disease
3 months ago by cmdcolin ★ 3.8k
2
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1
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1.2k
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Answer: Answer: extract sequence from genome by region
4 months ago by cmdcolin ★ 3.8k
0
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0
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429
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Comment: Comment: The Biostar Herald for Tuesday, December 19, 2023
4 months ago by cmdcolin ★ 3.8k
2
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0
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1.7k
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Answer: Answer: How to query 1000 genomes project VCF files for specific regions without downloa
4 months ago by cmdcolin ★ 3.8k
0
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0
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785
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Comment: Comment: Finding human .vcf files online to download
4 months ago by cmdcolin ★ 3.8k
1
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0
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645
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Comment: Comment: Fastest way to convert BED to GTF/GFF with gene_ids?
4 months ago by cmdcolin ★ 3.8k
0
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0
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13k
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Answer: Answer: Which program, tool, or strategy do you use to visualize genomic rearrangements?
4 months ago by cmdcolin ★ 3.8k
1
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1
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785
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Answer: Answer: Finding human .vcf files online to download
4 months ago by cmdcolin ★ 3.8k
0
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0
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348
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Comment: Comment: Annotate Unplaced Scaffold with Chromosome Information
4 months ago by cmdcolin ★ 3.8k
1
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0
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1.0k
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Comment: Comment: Using ggplot2 to make barplots of RNASeq data - maintaining sample metadata when
4 months ago by cmdcolin ★ 3.8k
0
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1
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572
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Comment: Comment: How can I map coordinates between two strains of yeast?
4 months ago by cmdcolin ★ 3.8k
0
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0
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827
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Comment: Comment: Circular genome browser
4 months ago by cmdcolin ★ 3.8k
1
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0
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734
views
Comment: Comment: How to overlap patient VCF with ClinVar database annotation using bedtools?
5 months ago by cmdcolin ★ 3.8k
1
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1
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566
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Answer: Answer: Finding exons that are always included
5 months ago by cmdcolin ★ 3.8k
0
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0
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598
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Comment: Comment: Strand bias in supplementary alignments from Nanopore
5 months ago by cmdcolin ★ 3.8k
1
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0
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3.2k
views
Answer: Answer: Visualization of maf alignments in JBrowse
5 months ago by cmdcolin ★ 3.8k
3
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1
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598
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Comment: Comment: Strand bias in supplementary alignments from Nanopore
5 months ago by cmdcolin ★ 3.8k
0
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1
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548
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Answer: Answer: Browser based tool for generating protein alignment figure
5 months ago by cmdcolin ★ 3.8k
1
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1
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827
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Comment: Comment: Circular genome browser
5 months ago by cmdcolin ★ 3.8k
0
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1
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573
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Comment: Comment: Low coverage, deletion and startloss? What do we see here?
5 months ago by cmdcolin ★ 3.8k
0
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0
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1.1k
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Comment: Comment: Map genome positions onto protein coordinates?
5 months ago by cmdcolin ★ 3.8k
0
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1
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573
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Comment: Comment: Low coverage, deletion and startloss? What do we see here?
5 months ago by cmdcolin ★ 3.8k
0
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0
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606
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Comment: Comment: How to make bam from start pos of read 1 and end pos of read 2 from paired end b
5 months ago by cmdcolin ★ 3.8k
0
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1
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1.1k
views
Comment: Comment: Map genome positions onto protein coordinates?
6 months ago by cmdcolin ★ 3.8k
510 results • Page 1 of 11
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