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1
vote
0
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541
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Comment:
Comment: The famous WGS dataset, Ashkenazi Trio?
10 months ago by
cmdcolin
★ 3.7k
2
votes
0
replies
713
views
Comment:
Comment: How to Split 3000 WGS CRAM files into 1Mbp length chunks
10 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
710
views
Comment:
Comment: Haplotype specific alleles
10 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
1.2k
views
Comment:
Comment: How to convert chromosome locations to gene symbols?
10 months ago by
cmdcolin
★ 3.7k
1
vote
0
replies
1.2k
views
Comment:
Comment: How to efficiently/quickly merge ~500k vcfs?
10 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
792
views
Comment:
Comment: The Biostar Herald for Monday, May 01, 2023
11 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
1.3k
views
Comment:
Comment: Is my estimated genome coverage correct?
11 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
3.7k
views
Comment:
Comment: Finding Pdb File For Specific Transcript
11 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
854
views
Comment:
Comment: Error parsing strand (?) from GFF line
12 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
1.1k
views
Comment:
Comment: RNA Sequencing and Vg pan -transcriptome build
12 months ago by
cmdcolin
★ 3.7k
1
vote
1
reply
2.0k
views
Comment:
Comment: How to perform synteny alignments and plots only with a gene?
12 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
1.1k
views
Comment:
Comment: How to remove homozygous reference genotypes from multi-sample vcf file based on
12 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
1.1k
views
Comment:
Comment: How to remove homozygous reference genotypes from multi-sample vcf file based on
12 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
926
views
Comment:
Comment: what does total count mean at a location in IGV
12 months ago by
cmdcolin
★ 3.7k
1
vote
0
replies
90k
views
Comment:
Comment: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
13 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
520
views
Comment:
Comment: Visualize variants and percentage of variants from one sample of Amplicon Seq da
14 months ago by
cmdcolin
★ 3.7k
1
vote
0
replies
2.1k
views
Comment:
Comment: Mapping a small number of contigs to a reference subsequence
14 months ago by
cmdcolin
★ 3.7k
0
votes
2
replies
2.3k
views
Comment:
Comment: bedGraph to bigwig
14 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
825
views
Comment:
Comment: JBrowse on GitHub (A question about file size)
14 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
829
views
Comment:
Comment: Extract alignment in fasta format from BAM/SAM file
14 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
1.1k
views
Comment:
Comment: Get length of the alignment from bam file with shell
14 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
1.1k
views
Comment:
Comment: batch sequence retrieval using exon coordinates
15 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
916
views
Comment:
Comment: remove CIGAR strings starting with insertion
updated 15 months ago by
Ram
43k • written 15 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
736
views
Comment:
Comment: Gene location of both inherited gene
15 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
1.9k
views
Comment:
Comment: find the mate of a read using pysam
15 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
1.9k
views
Comment:
Comment: find the mate of a read using pysam
15 months ago by
cmdcolin
★ 3.7k
1
vote
1
reply
4.4k
views
Comment:
Comment: pyCirclize - Circular visualization in Python
15 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
40k
views
Comment:
Comment: Difference Between "Mate Pair" And "Pair-End"
15 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
1.3k
views
Comment:
Comment: How is p-value calculated in MACS2
15 months ago by
cmdcolin
★ 3.7k
2
votes
1
reply
17k
views
Comment:
Comment: What are Supplementary Reads?
15 months ago by
cmdcolin
★ 3.7k
1
vote
0
replies
1.0k
views
Comment:
Comment: Visualization tools for phased haplotypes
16 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
1.0k
views
Comment:
Comment: Visualization tools for phased haplotypes
16 months ago by
cmdcolin
★ 3.7k
3
votes
0
replies
660
views
Comment:
Comment: The Biostar Herald for Monday, November 14, 2022
16 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
1.3k
views
Comment:
Comment: How to open/work with wig or tdf files
17 months ago by
cmdcolin
★ 3.7k
1
vote
0
replies
877
views
Comment:
Comment: Databases with Genes <-> Diseases relations
17 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
1.4k
views
Comment:
Comment: proper way to alter bgzf-compressed fastq files using htslib, multithreaded
18 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
1.4k
views
Comment:
Comment: proper way to alter bgzf-compressed fastq files using htslib, multithreaded
18 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
1.5k
views
Comment:
Comment: From fastq files to fasta
18 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
2.2k
views
Comment:
Comment: Tools to obtain sequence from bam file
18 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
2.2k
views
Comment:
Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
18 months ago by
cmdcolin
★ 3.7k
0
votes
2
replies
2.2k
views
Comment:
Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
18 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
1.0k
views
Comment:
Comment: Which VCF file to select for generating Multiple sequence alignment of a gene?
18 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
1.0k
views
Comment:
Comment: Which VCF file to select for generating Multiple sequence alignment of a gene?
18 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
649
views
Comment:
Comment: PAN GENOME versus REFERENCE GENOME
19 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
1.8k
views
Comment:
Comment: paired-end reads, idxstats, and samtools and grep
19 months ago by
cmdcolin
★ 3.7k
0
votes
0
replies
958
views
Comment:
Comment: Convert a cram file to fasta
19 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
958
views
Comment:
Comment: Convert a cram file to fasta
19 months ago by
cmdcolin
★ 3.7k
1
vote
0
replies
771
views
Comment:
Comment: Chromosome pair numbers in variant annotation.
19 months ago by
cmdcolin
★ 3.7k
0
votes
1
reply
2.9k
views
Comment:
Comment: How to determine assembly of a VCF?
19 months ago by
cmdcolin
★ 3.7k
2
votes
1
reply
1.4k
views
Comment:
Comment: Can IGV simultaneously show alignments for different reference genomes in differ
19 months ago by
cmdcolin
★ 3.7k
339 results • Page
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