User: firstorthopedicdoctor

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Posts by firstorthopedicdoctor

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After exporting output of WGCNA to VISANT, no network appeared
... Hello I used the WGCNA package to build a network of genes and exported it to Visant for visualization. In VisANT, I first choose clear then choose homo sapiens then file>> open>> however, the screen is still clear nothing appears Here are the first lines of the output file MAGED2 SL ...
R written 7 months ago by firstorthopedicdoctor0
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Comment: C: meta-analysis of geo dataset
... Done, I updated the question ...
written 8 months ago by firstorthopedicdoctor0
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differential expression of geodataset using limma (input files)
... hello My question after I download Geo soft files how I prepare the file to be suitable as input for limma package? I have read the manual but I could not find what I want?? ...
gene R forum written 8 months ago by firstorthopedicdoctor0 • updated 8 months ago by ATpoint38k
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meta-analysis of geo dataset
... I have downloaded multiple geodataset for one disease. How to combine genes in all dataset to calculate the differential gene expression in all datasets. I HAVE TRIED CROSMETA BUT I had an error when exporting the geodataset as it mentions GSEID is not available. I even tried it on the data in the v ...
gene R forum microarray written 8 months ago by firstorthopedicdoctor0

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