User: felix

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felix20
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Posts by felix

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Variant calling on Nanopore reads
... I am currently working on nanopore reads, and trying to calculate the SNP and Indel count. I mapped the reads with Minimap2. From here I called the variants with GATK. I know that GATK is actually written for short Illumina reads, so I was wondering if the results from the variant calling are trust ...
alignment genome written 8 months ago by felix20 • updated 7 months ago by colindaven2.3k

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