User: feander

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feander0
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Posts by feander

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Comment: C: OMA not finding numpy; pip and wget failing
... Quick follow-up...I just went ahead and ran it on the login node, hoping the database conversion step wasn't long enough to raise anyone's hackles. It wasn't! Now I have a test run going via SLURM and everything is looking good. Thanks a million! ...
written 26 days ago by feander0
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Comment: C: OMA not finding numpy; pip and wget failing
... Ah...you've nailed it. I can run "wget -O - http://google.com" on the login node, but if I try to do it via a SLURM script, it fails ("Resolving google.com (google.com)... failed: Name or service not known."). That was easy! I will have to ask the HPC powers-that-be if I can run part of the job on ...
written 26 days ago by feander0
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OMA not finding numpy; pip and wget failing
... I am at wit's end, and I can't find any post here that addresses this problem, so...help! I am trying to run OMA 2.4.1 on an HPC with SLURM. My main problem at the moment is that OMA can't find numpy. This is strange, because I was able to use "pip install" to install numpy, biopython and lxml (the ...
wget oma slurm numpy pip written 5 weeks ago by feander0

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