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Mapping Mouse RNAseq Marker Genes to Reactome Pathways
RNA-seq single-cell pathways reactome
updated 21 days ago by 43k • written 5 months ago by ▴ 40
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1.3k
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Answer: Answer: Transcription Start Site
5 weeks ago by el24 ▴ 40
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0
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1.2k
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Comment: Comment: How do I download a list of genes involved in cellular metabolism (in humans) ba
4 months ago by el24 ▴ 40
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2
replies
2.6k
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GeneActivity without Fragments file in Seurat for Integrating scRNA-seq and scATAC-seq
ATAC Fragments GeneActivity RNA Seurat
updated 12 months ago by ▴ 290 • written 23 months ago by ▴ 40
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812
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Comment: Comment: Join two .bed file in one RNAseq matrix and sum up duplicate rows
23 months ago by el24 ▴ 40
1
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3
replies
812
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Join two .bed file in one RNAseq matrix and sum up duplicate rows
big_data matrix bed RNA-seq R
updated 23 months ago by 21k • written 23 months ago by ▴ 40
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0
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338
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Generate Gene Feature Matrix from ATAC-seq data
integration atac bed bedmap rna
23 months ago by el24 ▴ 40
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0
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2.1k
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Comment: C: Mouse promoter regions
3.3 years ago by el24 ▴ 40
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1
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2.1k
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Comment: C: Mouse promoter regions
3.3 years ago by el24 ▴ 40
0
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1
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2.1k
views
Comment: C: Mouse promoter regions
3.3 years ago by el24 ▴ 40
6
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6
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2.1k
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Mouse promoter regions
promoter mouse chr
updated 3.3 years ago by 13k • written 3.3 years ago by ▴ 40
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0
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25k
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Comment: C: Error: Every gene contains at least one zero, cannot compute log geometric means
3.4 years ago by el24 ▴ 40
3
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1
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25k
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Answer: A: Error: Every gene contains at least one zero, cannot compute log geometric means
3.4 years ago by el24 ▴ 40
6
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3
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2.9k
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Extract data from a large bed file
bed alignment genome
updated 3.4 years ago by 20 • written 4.1 years ago by ▴ 40
1
vote
7
replies
6.5k
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Result of scanpy tools rank_genes_groups
gene scanpy seurat rank_gene_groups clustering
updated 3.6 years ago by ▴ 10 • written 4.0 years ago by ▴ 40
1
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0
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2.1k
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single cell ATAC-seq cicero gene activities in Seurat
cicero single-cell seurat scATACseq R
3.7 years ago by el24 ▴ 40
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0
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6.5k
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Comment: C: Result of scanpy tools rank_genes_groups
4.0 years ago by el24 ▴ 40
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1
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6.5k
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Comment: C: Result of scanpy tools rank_genes_groups
4.0 years ago by el24 ▴ 40
0
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1
reply
6.5k
views
Comment: C: Result of scanpy tools rank_genes_groups
4.0 years ago by el24 ▴ 40
1
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4
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1.1k
views
generate a matrix of gene expressions and TFs from bed files
ATAC_seq Bedtools
updated 4.0 years ago by 20 • written 4.1 years ago by ▴ 40
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0
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2.2k
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Comment: C: Cellranger Reanalyze NO barcode rank plot in web_summary.html
4.0 years ago by el24 ▴ 40
2
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4
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2.2k
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Cellranger Reanalyze NO barcode rank plot in web_summary.html
cellranger reanalyze warning scRNA
updated 4.0 years ago by 14k • written 4.0 years ago by ▴ 40
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0
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2.2k
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Comment: C: Cellranger Reanalyze NO barcode rank plot in web_summary.html
4.0 years ago by el24 ▴ 40
0
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0
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2.9k
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Comment: C: Extract data from a large bed file
4.1 years ago by el24 ▴ 40
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2
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1.1k
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Comment: C: generate a matrix of gene expressions and TFs from bed files
4.1 years ago by el24 ▴ 40
1
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0
replies
1.8k
views
Comment: C: Produce separate matrices from clustering expression data using scanpy
4.1 years ago by el24 ▴ 40
1
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2
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1.8k
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Produce separate matrices from clustering expression data using scanpy
RNA-Seq scanpy clustering leiden
4.1 years ago by el24 ▴ 40
0
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1
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3.1k
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Comment: C: Reference Transcriptome for Drosophila Melanogaster[orgn] with cellranger mkref
4.2 years ago by el24 ▴ 40
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0
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3.1k
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Comment: C: Reference Transcriptome for Drosophila Melanogaster[orgn] with cellranger mkref
4.2 years ago by el24 ▴ 40
6
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6
replies
3.1k
views
Reference Transcriptome for Drosophila Melanogaster[orgn] with cellranger mkref
gene software error
updated 4.2 years ago by 3.9k • written 4.2 years ago by ▴ 40
30 results • Page 1 of 1
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