User: aedan.r

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aedan.r0
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Comment: C: KEGG pathway gene lists differ between sources
... Thanks. I hadn't come across that site, but that gives a pretty clear resolution. I thought it was strange that two other sources - MSigDB and the gage package (https://bioconductor.org/packages/release/bioc/html/gage.html) - both had nearly the same lists, and both very different from KEGG, but I ...
written 5 weeks ago by aedan.r0
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KEGG pathway gene lists differ between sources
... Hi, I'm trying to get lists of genes belonging to KEGG pathways. I had been using MSigDB, but some of the KEGG pathways aren't in MSigDB, so for others I was getting them directly from KEGG. I've realised that for at least one pathway, the lists of genes differ a lot between KEGG and MSigDB. For e ...
msigdb kegg written 5 weeks ago by aedan.r0 • updated 5 weeks ago by igor11k

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