User: fagambaro3

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fagambaro310
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9 months, 3 weeks ago
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Posts by fagambaro3

<prev • 5 results • page 1 of 1 • next >
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Answer: A: Calculation of Bayes factor from BEAST
... Hello, The Bayes Factor is a ratio of two marginal likelihoods. But the output values from the PS/SS are the log marginal likelihoods (at least using BEAST v1.8). Hence, the difference between the log marginal likelihoods between two models will give you the log Bayes Factor. And that value is wha ...
written 3 months ago by fagambaro310
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Comment: C: FASTA FILE to TABLE R/python
... `Hey! Thanks for the help!! So, I first linearized my fasta as you suggested: awk '/^>/ {printf("%s%s\t",(N>0?"\n":""),$0);N++;next;} {printf("%s",$0);} END {printf("\n");}' < ipc214_S8_DENV4_consensus.fa Then i converted my fasta into csv: `fasta2csv.py ipc214_S8_DENV4_lineari ...
written 9 months ago by fagambaro310
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FASTA FILE to TABLE R/python
... Hi all, Does anyone knows who to convert a DNA sequence from a fasta file to a table of one column? Can be in R or python! I tried this fasta to table converter but is not working for me.. https://rstudio-pubs-static.s3.amazonaws.com/518943_a6bb21f87f594e6fb2aaa9ca2ef79cc0.html Then I also tried ...
fasta R written 9 months ago by fagambaro310 • updated 9 months ago by gayachit200
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Comment: C: Problem to install Pearl module Math CDF
... Sorry, I am new at using blogs to ask questions, so I am bit lost! Sorry and thanks! P.S you were right, " conda install -c bioconda perl-math-cdf" .. worked perfectly!! ...
written 9 months ago by fagambaro310
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(Closed) Problem to install Pearl module Math CDF
... Trying to install Pearl module Math CDF I have the following error after `$make install` cd cdflib && make LIBPERL_A="libperl.a" LINKTYPE="dynamic" OPTIMIZE="-O2 -g" LD="x86_64-linux-gnu-gcc" PREFIX="/usr/local" PASTHRU_DEFINE=' ' PASTHRU_INC=' ' make[1]: Entering directory '/mnt/c/ ...
software error written 9 months ago by fagambaro310 • updated 9 months ago by _r_am31k

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