User: predeus

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transcriptome genome RNA-seq

updated 9 weeks ago by GenoMax 151k • written 9 weeks ago by predeus ★ 2.1k

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2

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484

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T2T genome assembly reference

updated 12 weeks ago by cmdcolin ★ 4.2k • written 12 weeks ago by predeus ★ 2.1k

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3

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798

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RNA-seq

4 months ago by predeus ★ 2.1k

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4

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6.8k

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kraken2 nanopore kraken

updated 8 months ago by ChillarAnand ▴ 80 • written 3.9 years ago by predeus ★ 2.1k

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11

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1.9k

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STAR Hisat2 multimapper

updated 10 months ago by rfran010 ★ 1.5k • written 10 months ago by predeus ★ 2.1k

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312

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rna-seq proteome codon-usage-bias

10 months ago by predeus ★ 2.1k

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1

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711

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TCR VDJ BCR 10x

updated 13 months ago by GenoMax 151k • written 13 months ago by predeus ★ 2.1k

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5

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1.2k

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fastq SRA

15 months ago by predeus ★ 2.1k

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7

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1.6k

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CRAM filtering samtools SAM BAM

updated 18 months ago by Istvan Albert 102k • written 18 months ago by predeus ★ 2.1k

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1

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1.1k

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R NCBI bacteria taxonomy

updated 21 months ago by Philipp Bayer 8.8k • written 21 months ago by predeus ★ 2.1k

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13

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2.6k

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bam ngs mapping

21 months ago by predeus ★ 2.1k

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703

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refseq clustering ANI bacteria

21 months ago by predeus ★ 2.1k

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3

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1.1k

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bbduk bbmap bbtools

updated 22 months ago by GenoMax 151k • written 23 months ago by predeus ★ 2.1k

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3

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2.2k

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quantification RSEM RNA-seq Salmon

2.1 years ago by predeus ★ 2.1k

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0

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557

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SAM hisat2 STAR tag BAM

2.2 years ago by predeus ★ 2.1k

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10

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2.7k

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ncbi taxonomy refseq

updated 2.4 years ago by LChart 4.9k • written 2.5 years ago by predeus ★ 2.1k

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3.4k

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rna-seq paired-end bbduk trimming adapter

updated 2.7 years ago by GenoMax 151k • written 2.7 years ago by predeus ★ 2.1k

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4

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1.4k

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bedtools BAM

updated 23 months ago by Ram 45k • written 3.1 years ago by predeus ★ 2.1k

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3

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908

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seqtk fastq sequence parsing

updated 3.2 years ago by cpad0112 21k • written 3.2 years ago by predeus ★ 2.1k

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3

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1.4k

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SRA Entrez-direct ENA Entrez

3.4 years ago by predeus ★ 2.1k

6

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10

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2.5k

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long-reads illumina genome-assembly

updated 13 months ago by Ram 45k • written 3.7 years ago by predeus ★ 2.1k

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3

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1.6k

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cycle-correction single-cell regression scRNA-seq bias

updated 3.7 years ago by Friederike 9.0k • written 3.7 years ago by predeus ★ 2.1k

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3

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1.5k

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scRNA-seq single cell RNA-Seq

updated 3.7 years ago by bosun1988 • 0 • written 4.3 years ago by predeus ★ 2.1k

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1.2k

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metagenomics WGS pipeline bacterial

3.7 years ago by predeus ★ 2.1k

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9

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2.5k

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samtools bam

4.0 years ago by predeus ★ 2.1k

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5

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2.5k

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RNA-Seq scRNA-Seq whole blood single cell

2.1 years ago by predeus ★ 2.1k

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5

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5.5k

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exome agilent roche nimblegen illumina

updated 4.2 years ago by jon.klonowski ▴ 210 • written 7.5 years ago by predeus ★ 2.1k

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5

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1.4k

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RNA-Seq scRNA-Seq single cell non-model organism

4.2 years ago by predeus ★ 2.1k

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6

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2.3k

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microarray GEO gene expression omnibus

4.9 years ago by predeus ★ 2.1k

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4

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4.5k

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multiple-sequence-alignment 16S multiple-alignment

updated 2.0 years ago by Ram 45k • written 5.1 years ago by predeus ★ 2.1k

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3

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1.2k

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provean sift polyphen missense sift4g

5.1 years ago by predeus ★ 2.1k

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2

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1.1k

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meme meme-chip meme suite motif chip-seq

updated 5.2 years ago by Asaf 10k • written 5.2 years ago by predeus ★ 2.1k

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2

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1.0k

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phylogeny tree eukaryote

updated 5.4 years ago by Vitis ★ 2.6k • written 5.4 years ago by predeus ★ 2.1k

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5

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1.6k

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annotation eukaryotic gene prediction

updated 5.7 years ago by Biostar 20 • written 5.8 years ago by predeus ★ 2.1k

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25

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15k

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11 follow

visualization whole-genome alignment mauve harvest

updated 6.0 years ago by gina • 0 • written 7.2 years ago by predeus ★ 2.1k

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7

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11k

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GEO SRA GSM GSE SRAdb

updated 6.0 years ago by Helen ▴ 70 • written 8.1 years ago by predeus ★ 2.1k

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6

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9.9k

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Assembly nanopore polishing

updated 6.1 years ago by sullis02 ▴ 40 • written 7.0 years ago by predeus ★ 2.1k

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6

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2.8k

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Assembly Bandage long reads Unicycler

updated 6.3 years ago by Biostar 20 • written 6.4 years ago by predeus ★ 2.1k

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2

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2.1k

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blocking primers PCR amplification

updated 6.5 years ago by lufiealf • 0 • written 7.3 years ago by predeus ★ 2.1k

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3

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1.2k

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sequence clustering blast

6.5 years ago by predeus ★ 2.1k

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6

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4.2k

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pfam COG enzyme protein

6.6 years ago by predeus ★ 2.1k

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4

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2.2k

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pacbio nanopore Assembly diploid

updated 6.7 years ago by harish ▴ 470 • written 6.7 years ago by predeus ★ 2.1k

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2.2k

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bacteria pacbio pilon illumina

7.2 years ago by predeus ★ 2.1k

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7

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3.7k

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prokka bacteria annotation

updated 7.3 years ago by Asaf 10k • written 7.3 years ago by predeus ★ 2.1k

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4

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1.7k

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bioperl fasta fastq

updated 7.7 years ago by Chris Fields ★ 2.2k • written 7.7 years ago by predeus ★ 2.1k

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0

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1.3k

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rRNA multiple-alignment SILVA

updated 2.0 years ago by Ram 45k • written 7.8 years ago by predeus ★ 2.1k

112

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81

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41k

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17 follow

duplicates illumina

updated 2.7 years ago by GenoMax 151k • written 8.4 years ago by predeus ★ 2.1k

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1

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1.5k

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RNA-Seq IGV

8.4 years ago by predeus ★ 2.1k

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5

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3.5k

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ngs wgs genome assembly

8.4 years ago by predeus ★ 2.1k

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10

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1.9k

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ngs adapter blastn

updated 8.4 years ago by Farbod ★ 3.4k • written 8.4 years ago by predeus ★ 2.1k