User: Kiki_01

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Kiki_010
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Posts by Kiki_01

<prev • 6 results • page 1 of 1 • next >
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Comment: C: BLAST and GFF script to find locations of SNPs
... Dear colindaven, thank you for your respond, but that's what i have to do according to my thesis. I have found SNPs in transcript and i need to find their locations in genome using script with BLAST results and GFF file together. ...
written 8 months ago by Kiki_010
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BLAST and GFF script to find locations of SNPs
... Hi! I found SNPs in transcript using GATK and I need to find their locations in genes. I did the BLAST trascripts to the genome. Does anyone know how should python script looks like if I'm trying to connect together my BLAST results with GFF file to find in which genes SNPs are located? I'd apprecia ...
gff blast script snp written 8 months ago by Kiki_010
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Comment: C: Trimming didnt work
... Thank you for your help! ...
written 11 months ago by Kiki_010
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Comment: C: Trimming didnt work
... ...
written 11 months ago by Kiki_010 • updated 11 months ago by GenoMax94k
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Comment: C: Trimming didnt work
... By the report I got I think it looks nice, but I thought anything it would change. Report is the same as before the trimming one. Maybe the values I used were not strick enough for my data? ...
written 11 months ago by Kiki_010
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Trimming didnt work
... Hi! Im new here. I started doing the RNA-Seq analysis. I have data from Illumina. I did the quality control with fastqc and tried to trim it using trimmomatic program and my data didnt change at all. I take under consideration that maybe i should change the values i used. Heres the command i used. I ...
rna-seq written 11 months ago by Kiki_010 • updated 11 months ago by GenoMax94k

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