User: lxiao63

gravatar for lxiao63
lxiao630
Reputation:
0
Status:
New User
Last seen:
4 weeks, 1 day ago
Joined:
1 month, 2 weeks ago
Email:
l******@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by lxiao63

<prev • 3 results • page 1 of 1 • next >
0
votes
1
answer
70
views
1
answer
Obtain population information of 1092 sample of the 1000 genome project
... I have downloaded genomic data for 1000 g phase I samples from https://www.ncbi.nlm.nih.gov/projects/faspftp/1000genomes/. I checked the resultant .FAM file (1092 rows, each corresponds to 1 sample in 1000 g phase I release) and noted that there is a column named `member` whose first 20 cases are : ...
1000 genome project written 5 weeks ago by lxiao630 • updated 5 weeks ago by JC9.6k
0
votes
1
answer
134
views
1
answers
Comment: C: How to load 1000 genome vcf and tbi file into R
... Thank you Sam. 1. Is there a way to convert vcf.gz and vcf.gz.tbi to .ped and .info with R? I have no previous experience with PLINK. Of course I may have to learn PLINK if I have to. 2. I downloaded SNP data from the webpage you suggested. Taking Chr16 as an example, I downloaded 1kg_phase1_chr16 ...
written 6 weeks ago by lxiao630
1
vote
1
answer
134
views
1
answer
How to load 1000 genome vcf and tbi file into R
... Dear all, I am very much a beginner in genetic data analysis. I am recently trying to learn to perform GWAS in R through the article "A guide to genome-wide association analysis and post-analytic interrogation". During SNP imputation, the authors used SNP data on Chr16 for demonstration. The author ...
gene R snp written 6 weeks ago by lxiao630 • updated 6 weeks ago by Sam2.6k

Latest awards to lxiao63

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1260 users visited in the last hour