User: DF

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DF100
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6 years, 5 months ago
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6 years, 6 months ago
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Posts by DF

<prev • 4 results • page 1 of 1 • next >
6
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Answer: A: Add A New Feature In Biopython
... Here's a small snippet of code for people (like myself) struggling through BioPython. I'm writing code to fix some annotations that are improperly annotated as being exact when they should really be open-ended (i.e. it's not certain where the feature actually starts). This bit was easy, but I got to ...
written 6.5 years ago by DF100
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Comment: C: Add A New Feature In Biopython
... I'm working on an idiot's guide to creating and adding a new feature to a sequence, will post it as an answer to this post once it's done. ...
written 6.5 years ago by DF100
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Comment: C: Add A New Feature In Biopython
... Thanks, yes, basically silly by me, staring at a screen too long and using a SeqRecord when I wanted a SeqFeature. Worked out the use of ambiguous locations too. ...
written 6.5 years ago by DF100
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Add A New Feature In Biopython
... Hi, I would like to overwrite a feature in a genbank file using BioPython, using ambiguous locations. For example, I can set an ambiguous location: from Bio import SeqFeature start_pos = SeqFeature.AfterPosition(5) end_pos = SeqFeature.BeforePosition(10) my_location = SeqFeature.FeatureLocation(st ...
feature biopython genbank written 6.5 years ago by DF100 • updated 10 months ago by michaelfoxfox0

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