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Comment:
Comment: Install PacBio lima via conda fails
3 months ago by
Medhat
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475
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Comment:
Comment: Filtering the vcf file
3 months ago by
Medhat
9.8k
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834
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Comment:
Comment: Variant Analyst Opening in Qatar
4 months ago by
Medhat
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1
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1.8k
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Comment:
Comment: How to download a file from zenodo link without leaving terminal?
7 months ago by
Medhat
9.8k
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0
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4.2k
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Comment:
Comment: When to use .vcf or .gvcf files from GATK HaplotypeCaller?
8 months ago by
Medhat
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1.3k
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Comment:
Comment: guppy basecaller giving error while basecalling
19 months ago by
Medhat
9.8k
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0
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884
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Comment:
Comment: More Efficient: Whole Genome VCF splitting with and without tbi file
19 months ago by
Medhat
9.8k
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1.8k
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Comment:
Comment: What are your preferred programs for processing DNA long reads? (de novo assembl
19 months ago by
Medhat
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0
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1
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1.6k
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Comment:
Comment: Why some insertions are symbolic in ALT column?
19 months ago by
Medhat
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1
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2.1k
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Comment:
Comment: Problem with GPU guppy_basecaller and SLURM
20 months ago by
Medhat
9.8k
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1
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2.1k
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Comment: Problem with GPU guppy_basecaller and SLURM
20 months ago by
Medhat
9.8k
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0
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912
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Comment:
Comment: Variant calling analysis
20 months ago by
Medhat
9.8k
1
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1
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912
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Comment:
Comment: Variant calling analysis
20 months ago by
Medhat
9.8k
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703
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Comment:
Comment: Do we have any disease specific SNVs database?
23 months ago by
Medhat
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7.5k
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Comment:
Comment: conda create env using .yml file leads to dependency conflicts
23 months ago by
Medhat
9.8k
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1
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2.1k
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Comment:
Comment: GATK showing error of reference file index
23 months ago by
Medhat
9.8k
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0
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724
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Comment:
Comment: Methods for downsampling coverage in a VCF
23 months ago by
Medhat
9.8k
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1
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1.2k
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Comment:
Comment: I have a reference genome explained by accession number instead of chromosome nu
24 months ago by
Medhat
9.8k
1
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2
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3.4k
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Comment:
Comment: SV calling using giraffe/vg
2.0 years ago by
Medhat
9.8k
4
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1.0k
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Comment:
Comment: BIOINFORMATICS
2.0 years ago by
Medhat
9.8k
2
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1.1k
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Comment:
Comment: Looking for tools to individuate gene-gene correlations from a few candidates
2.1 years ago by
Medhat
9.8k
0
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0
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1.2k
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Comment:
Comment: No CR tag in the sam file mapped by STARsolo (10x v3.1 data)
2.1 years ago by
Medhat
9.8k
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0
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2.2k
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Comment:
Comment: Different results in finding human sequences from metagenomes (bowtie2 and Krake
2.1 years ago by
Medhat
9.8k
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0
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1.5k
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Comment:
Comment: bedtools intersect multiple files using for loop
2.2 years ago by
Medhat
9.8k
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1.5k
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Comment:
Comment: bedtools intersect multiple files using for loop
2.2 years ago by
Medhat
9.8k
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1.0k
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Comment:
Comment: Postdoctoral Associate , Baylor College of Medicine, Human Genome Sequencing Cen
2.2 years ago by
Medhat
9.8k
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1
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1.7k
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Comment:
Comment: Introducing Cramino: a *fast* QC tool for long reads
2.2 years ago by
Medhat
9.8k
0
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1
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1.3k
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Comment:
Comment: For loop RNA Sequencing alignment
2.3 years ago by
Medhat
9.8k
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1.5k
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Comment:
Comment: sorting multiple .bam files in linux cluster
2.4 years ago by
Medhat
9.8k
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0
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1.3k
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Comment:
Comment: gosling.js and React 1.7+
2.4 years ago by
Medhat
9.8k
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1
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1.3k
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Comment:
Comment: gosling.js and React 1.7+
2.4 years ago by
Medhat
9.8k
1
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1
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1.4k
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Comment:
Comment: Leaky RNA
2.4 years ago by
Medhat
9.8k
0
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0
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1.1k
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Comment:
Comment: Staff Scientist - Bioinformatician, Baylor College of Medicine, Human Genome Seq
2.5 years ago by
Medhat
9.8k
0
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1
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1.8k
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Comment:
Comment: Biopython Code to Convert DNA FASTA file to Protein FASTA file
2.5 years ago by
Medhat
9.8k
0
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0
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1.0k
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Comment:
Comment: getting the coordinates of mapped regions from a bam file
2.6 years ago by
Medhat
9.8k
1
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0
replies
1.6k
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Comment:
Comment: Programming languages in industry
2.6 years ago by
Medhat
9.8k
0
votes
0
replies
1.6k
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Comment:
Comment: Programming languages in industry
2.6 years ago by
Medhat
9.8k
0
votes
0
replies
1.3k
views
Comment:
Comment: Source of soft clipped reads from target sequencing
2.7 years ago by
Medhat
9.8k
0
votes
1
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763
views
Comment:
Comment: Align chimpanzee genome
2.7 years ago by
Medhat
9.8k
1
vote
0
replies
982
views
Comment:
Comment: How to generate a bam file with reads of only a certain length?
2.7 years ago by
Medhat
9.8k
1
vote
1
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982
views
Comment:
Comment: How to generate a bam file with reads of only a certain length?
2.7 years ago by
Medhat
9.8k
0
votes
0
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963
views
Comment:
Comment: how to visulize structure variants
2.7 years ago by
Medhat
9.8k
0
votes
0
replies
1.1k
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Comment:
Comment: liftOver input file
2.9 years ago by
Medhat
9.8k
0
votes
0
replies
2.0k
views
Comment:
Comment: How to extract reads that support the structural variants using the vcf file and
3.0 years ago by
Medhat
9.8k
0
votes
0
replies
1.9k
views
Comment:
Comment: Select variants that exist in all samples from a merged VCF file using bcftools
3.0 years ago by
Medhat
9.8k
0
votes
1
reply
1.9k
views
Comment:
Comment: Select variants that exist in all samples from a merged VCF file using bcftools
3.0 years ago by
Medhat
9.8k
0
votes
1
reply
937
views
Comment:
Comment: Tool that finds direct DNA repeats with mismatches
3.4 years ago by
Medhat
9.8k
0
votes
0
replies
1.4k
views
Comment:
Comment: Pipeline version control system, pipeline storage
3.4 years ago by
Medhat
9.8k
0
votes
0
replies
2.5k
views
Comment:
Comment: install R package
3.6 years ago by
Medhat
9.8k
0
votes
0
replies
1.8k
views
Comment:
Comment: error on extracting a snp from vcf file using bcftools
3.6 years ago by
Medhat
9.8k
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