Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
0
replies
1.2k
views
Comment: Comment: How to generate a bam file with reads of only a certain length?
3.1 years ago by Medhat 9.8k
1
vote
1
reply
1.2k
views
Comment: Comment: How to generate a bam file with reads of only a certain length?
3.1 years ago by Medhat 9.8k
0
votes
0
replies
1.2k
views
Comment: Comment: how to visulize structure variants
3.1 years ago by Medhat 9.8k
2
votes
1
reply
1.2k
views
Answer: Answer: how to visulize structure variants
3.1 years ago by Medhat 9.8k
1
vote
2
replies
5.1k
views
Using PRINSEQ lite with zipped paired-end illumina reads
prinseq next-gen-sequencing quality-reads Illumina
updated 3.2 years ago by • 0 • written 10.8 years ago by 9.8k
0
votes
0
replies
1.3k
views
Comment: Comment: liftOver input file
3.3 years ago by Medhat 9.8k
0
votes
0
replies
2.1k
views
Comment: Comment: How to extract reads that support the structural variants using the vcf file and
3.4 years ago by Medhat 9.8k
76
votes
14
replies
18k
views
15 follow
Tutorial: List Of Bioinformatics Books
books
updated 2.4 years ago by 45k • written 12.1 years ago by 9.8k
0
votes
0
replies
2.2k
views
Comment: Comment: Select variants that exist in all samples from a merged VCF file using bcftools
3.4 years ago by Medhat 9.8k
0
votes
1
reply
2.2k
views
Comment: Comment: Select variants that exist in all samples from a merged VCF file using bcftools
3.4 years ago by Medhat 9.8k
1
vote
4
replies
2.2k
views
Select variants that exist in all samples from a merged VCF file using bcftools
SNVs bcftools
3.4 years ago by Medhat 9.8k
0
votes
1
reply
1.1k
views
Comment: Comment: Tool that finds direct DNA repeats with mismatches
3.8 years ago by Medhat 9.8k
0
votes
0
replies
1.6k
views
Comment: Comment: Pipeline version control system, pipeline storage
3.8 years ago by Medhat 9.8k
2
votes
3
replies
3.5k
views
error while using plant ensembl biomart
software error gene ensembl biomart
updated 3.8 years ago by • 0 • written 7.6 years ago by 9.8k
0
votes
0
replies
833
views
Answer: Answer: Retrieve reads overlapping indels
3.9 years ago by Medhat 9.8k
20
votes
12
replies
41k
views
7 follow
Forum: When To Use Sed Awk Over Perl Or Python
perl python awk
updated 2.3 years ago by 45k • written 11.5 years ago by 9.8k
0
votes
0
replies
2.9k
views
Comment: Comment: install R package
4.0 years ago by Medhat 9.8k
0
votes
0
replies
2.0k
views
Comment: Comment: error on extracting a snp from vcf file using bcftools
4.0 years ago by Medhat 9.8k
0
votes
1
reply
2.0k
views
Comment: Comment: error on extracting a snp from vcf file using bcftools
4.0 years ago by Medhat 9.8k
0
votes
0
replies
2.0k
views
Answer: Answer: error on extracting a snp from vcf file using bcftools
4.0 years ago by Medhat 9.8k
0
votes
0
replies
873
views
Job: Postdoctoral Associate , Baylor College of Medicine, Human Genome Sequencing Center, Houston, United States
TGS NGS
updated 4.0 years ago by 45k • written 4.1 years ago by 9.8k
0
votes
0
replies
1.2k
views
Comment: Comment: Bioinformatician
4.1 years ago by Medhat 9.8k
0
votes
1
reply
2.5k
views
Comment: Comment: HISAT2 Genome indexing
4.1 years ago by Medhat 9.8k
2
votes
1
reply
2.0k
views
Samtools reheader Numerical result out of range
samtools header bam
4.1 years ago by Medhat 9.8k
2
votes
0
replies
2.0k
views
Answer: Answer: Samtools reheader Numerical result out of range
4.1 years ago by Medhat 9.8k
0
votes
0
replies
1.3k
views
Comment: Comment: Why we have exons that start and end at the same coordinate?!
4.2 years ago by Medhat 9.8k
2
votes
2
replies
1.3k
views
Why we have exons that start and end at the same coordinate?!
gtf exon GRCh38
updated 4.2 years ago by 48k • written 4.2 years ago by 9.8k
0
votes
0
replies
2.0k
views
Comment: Comment: Gene Labels (ggplot2)
4.2 years ago by Medhat 9.8k
1
vote
1
reply
2.1k
views
Answer: Comment: Select one variant from multiple in ALT in VCF file
4.2 years ago by Medhat 9.8k
0
votes
1
reply
1.2k
views
Comment: C: how to use unix tools to convert VCF genotypes like '1|1' to this '2'
4.3 years ago by Medhat 9.8k
0
votes
0
replies
1.1k
views
Comment: C: Structural variations intersection
4.3 years ago by Medhat 9.8k
1
vote
1
reply
3.6k
views
Comment: C: Problem using PicardTools MarkDuplicates: SortingCollection: There is not enough
4.3 years ago by Medhat 9.8k
0
votes
1
reply
1.8k
views
Comment: C: Extracting the Best sequence per genomic region in a genome based on the Best e-
4.3 years ago by Medhat 9.8k
2
votes
0
replies
1.8k
views
Answer: C: Extracting the Best sequence per genomic region in a genome based on the Best e-
4.3 years ago by Medhat 9.8k
0
votes
0
replies
1.4k
views
Comment: C: fastqc report and quality check
4.3 years ago by Medhat 9.8k
1
vote
0
replies
2.9k
views
Comment: C: Pacific Bio Long Reads vs Illumina Short Reads
4.3 years ago by Medhat 9.8k
2
votes
0
replies
2.9k
views
Comment: C: Pacific Bio Long Reads vs Illumina Short Reads
4.3 years ago by Medhat 9.8k
0
votes
0
replies
4.4k
views
Comment: C: Mappability file for hg38
4.4 years ago by Medhat 9.8k
5
votes
2
replies
4.4k
views
Mappability file for hg38
sequence mappabilit
4.4 years ago by Medhat 9.8k
1
vote
2
replies
4.1k
views
What do you use to generates summary statistics of sequence and quality data for PacBio?
genome sequence Assembly pacbio next-gen
updated 3.5 years ago by 45k • written 10.9 years ago by 9.8k
0
votes
0
replies
2.1k
views
Comment: C: how to change header of fasta file
4.7 years ago by Medhat 9.8k
0
votes
0
replies
5.1k
views
Comment: C: Kraken2 Error in buildind NCBI bacterial database
4.7 years ago by Medhat 9.8k
1
vote
2
replies
5.1k
views
Answer: C: Kraken2 Error in buildind NCBI bacterial database
4.7 years ago by Medhat 9.8k
2
votes
1
reply
4.8k
views
Answer: A: bcftools error duplicate samples
4.7 years ago by Medhat 9.8k
0
votes
0
replies
5.5k
views
Comment: C: Things you wish you knew when entering the bioinformatics field
4.7 years ago by Medhat 9.8k
2
votes
1
reply
5.5k
views
Comment: C: Things you wish you knew when entering the bioinformatics field
4.7 years ago by Medhat 9.8k
1
vote
0
replies
1.1k
views
Job: PostDoc position at Human Genome Sequencing Center @ Baylor College of Medicine, Houston, TX, USA
postdoc metagenomics
updated 2.0 years ago by 45k • written 4.8 years ago by 9.8k
4
votes
0
replies
5.1k
views
Comment: C: Converting MAF to Fasta
4.8 years ago by Medhat 9.8k
0
votes
10
replies
4.5k
views
Tools for metagenomics classification using long reads
metagenomics sequen alignment
updated 4.8 years ago by ▴ 30 • written 7.2 years ago by 9.8k
0
votes
0
replies
1.7k
views
Comment: C: Understanding VCF : 0/0 v 0/1 v 1/0 v 1/1 etc
4.8 years ago by Medhat 9.8k
1,014 results • Page 2 of 21
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6