User: dahun73

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dahun7310
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3 months, 4 weeks ago
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Posts by dahun73

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Filtering repetitive element during mapping
... Hello, I have a question for mapping. I want to align mm10 genome without any repetitive element but it is hard to get a repetitive element sequence. RepBase is not free to use for individual user. Is there any good suggestion for mapping without repetitive element? ...
alignment mapping rna-seq written 2 days ago by dahun7310 • updated 2 days ago by JC10k
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Convert BED to BAM files
... Hello, I have question during analyzing eCLIP-seq data. Someone converted BED file to BAM file during analyzing. Can I try analyzing this BAM files? I concerned that BED are about 3GB, but BAM are just 80MB. I've known that there are many information in BAM file, and I've heard that it's not good ...
eclip clip rna-seq written 23 days ago by dahun7310
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Local installation of UCSC Genome Browser
... Hi.I have some questions for local installation of UCSC genome browser. I know that there are 5 methods of installation(https://genome.ucsc.edu/goldenPath/help/mirror.html ). But I'm poor at computer managing. So I have chosen 4th pathway(GBIC installation). https://genome.ucsc.edu/goldenpath/hel ...
genome ucsc browser written 3 months ago by dahun7310 • updated 3 months ago by RamRS27k

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