User: mitmitrovic

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Posts by mitmitrovic

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Simple gene region plot
... Hi! I'm wondering whether there are simple tools (e.g. Java, R/Bioconductor) available for plotting positions of custom SNPs on top of gene region (exons and introns). I don't have p-values for these SNPs and LD map is not of my interest - I'm aware of SNAP, SNIPA, LocusZoom etc, but all I want is ...
gene R snp written 5.2 years ago by mitmitrovic0 • updated 3.9 years ago by Ibrahim Tanyalcin1.0k
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Limma - Special Case Of Contrasting
... Dear all! I'm trying to identify differentially expressed genes (DEGs) using limma with the following Targets file: CEL_file donor treatmemt cell_type file1 1 A C2 file2 1 B C2 file3 2 A C2 file4 2 B C2 file5 2 A C1 file6 2 B C1 file7 ...
limma written 7.3 years ago by mitmitrovic0 • updated 7.3 years ago by Ryan Thompson3.4k

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