User: tirichl
tirichl • 20
- Reputation:
- 20
- Status:
- New User
- Location:
- Wüzrburg
- Last seen:
- 2 months ago
- Joined:
- 9 months, 2 weeks ago
- Email:
- t************@web.de
Posts by tirichl
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... Hey,
I have several hundred files that look like this:
a.file
#genomic positions
1, 3, 4, 9, 10
#factors
a, b, d, g
Each file holds multiple genomic positions (numbers) and factors (characters). I want to investigate, whether there are genomic positions that frequently co-occu ...
written 9 weeks ago by
tirichl • 20
• updated
9 weeks ago by
jordi.planells • 330
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Comment:
C: rgb to hex in GRanges Object in R
... Hey, It worked with `K562.hmm$V9 <- sapply(strsplit(K562.hmm$V9, ","), function(x)
rgb(x[1], x[2], x[3], maxColorValue=255))`
Thank you for your help! :) ...
written 3 months ago by
tirichl • 20
0
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1
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130
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Comment:
C: rgb to hex in GRanges Object in R
... Thank you for your answer! There is no distinct error: When i import a file with hex-values, it just doesn't recognizes them and prints NA only. ...
written 3 months ago by
tirichl • 20
5
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1
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130
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... Hey,
I have the following problem: using the `karyoploteR` package in R, i want to plot chromatin configuration along the genome as a colored bar. The GRanges Object with the chromatin regions has a column for that ("V9") with rgb values associated with each region. However, the `kpPlotRegions` func ...
written 3 months ago by
tirichl • 20
• updated
3 months ago by
Friederike ♦ 6.7k
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