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Comment: Comment: biomaRt: Timeout on getBM().
7 days ago by txema.heredia ▴ 110
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0
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423
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Answer: Answer: KEGG analysis in R
7 days ago by txema.heredia ▴ 110
0
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0
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105
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Inferring cell identity/genotype in single cells with missing information
cell seurat single score
8 days ago by txema.heredia ▴ 110
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0
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373
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Comment: Comment: Single cell demultiplexing using 10x and TotalSeq-B
4 weeks ago by txema.heredia ▴ 110
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3
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373
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Single cell demultiplexing using 10x and TotalSeq-B
demultiplexing cellranger antibodies single-cell
4 weeks ago by txema.heredia ▴ 110
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0
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550
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Comment: Comment: Can I infer the fraction of replicating cells from bulk RNA-seq data?
updated 7 months ago by 43k • written 7 months ago by ▴ 110
2
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3
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550
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Can I infer the fraction of replicating cells from bulk RNA-seq data?
replication apoptosis
updated 7 months ago by 43k • written 7 months ago by ▴ 110
2
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1
reply
495
views
DESeq2 design comparing changes through 2 timepoints of 2 different treatments.
RNA-seq deseq2
updated 7 months ago by 14k • written 7 months ago by ▴ 110
2
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7
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1.1k
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Tool to search for missing genes among genome annotation versions?
annotation
updated 8 months ago by 4.2k • written 8 months ago by ▴ 110
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1
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1.1k
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Comment: Comment: Tool to search for missing genes among genome annotation versions?
8 months ago by txema.heredia ▴ 110
0
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1
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633
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Help manually processing strand in paired-end reads when fishing for lariats in bulk RNA-seq
lariat splicing rna-seq
10 months ago by txema.heredia ▴ 110
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0
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633
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Answer: Answer: Help manually processing strand in paired-end reads when fishing for lariats in
10 months ago by txema.heredia ▴ 110
0
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0
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361
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Differential Gene Expression analysis in heterogeneous tissues
RNA-seq deseq2
updated 10 months ago by 43k • written 10 months ago by ▴ 110
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0
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3.0k
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Comment: Comment: Aberrant splicing in bulk RNAseq
11 months ago by txema.heredia ▴ 110
0
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1
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3.0k
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Comment: Comment: Aberrant splicing in bulk RNAseq
11 months ago by txema.heredia ▴ 110
0
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1
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3.0k
views
Comment: Comment: Aberrant splicing in bulk RNAseq
11 months ago by txema.heredia ▴ 110
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0
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3.0k
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Comment: Comment: Aberrant splicing in bulk RNAseq
11 months ago by txema.heredia ▴ 110
0
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2
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3.0k
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Comment: Comment: Aberrant splicing in bulk RNAseq
12 months ago by txema.heredia ▴ 110
0
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1
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3.0k
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Comment: Comment: Aberrant splicing in bulk RNAseq
12 months ago by txema.heredia ▴ 110
0
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1
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3.0k
views
Comment: Comment: Aberrant splicing in bulk RNAseq
12 months ago by txema.heredia ▴ 110
0
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0
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412
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BULK mRNA-seq with UMIs. Does it make sense to run bedtools genomecov?
RNAseq gene-length normalization
13 months ago by txema.heredia ▴ 110
13
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21
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3.0k
views
6 follow
Aberrant splicing in bulk RNAseq
aberrant-splicing transcript isoform exon
updated 10 months ago by • 0 • written 14 months ago by ▴ 110
0
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0
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3.0k
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Comment: Comment: Aberrant splicing in bulk RNAseq
14 months ago by txema.heredia ▴ 110
0
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1
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3.0k
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Comment: Comment: Aberrant splicing in bulk RNAseq
14 months ago by txema.heredia ▴ 110
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0
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1.7k
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Comment: Comment: Mapped reads not mapping to a real sequence?
14 months ago by txema.heredia ▴ 110
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3
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1.7k
views
Comment: Comment: Mapped reads not mapping to a real sequence?
14 months ago by txema.heredia ▴ 110
0
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1
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1.7k
views
Comment: Comment: Mapped reads not mapping to a real sequence?
14 months ago by txema.heredia ▴ 110
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0
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1.7k
views
Comment: Comment: Mapped reads not mapping to a real sequence?
14 months ago by txema.heredia ▴ 110
0
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1
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1.7k
views
Comment: Comment: Mapped reads not mapping to a real sequence?
14 months ago by txema.heredia ▴ 110
8
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13
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1.7k
views
Mapped reads not mapping to a real sequence?
bam sam samtools kallisto
14 months ago by txema.heredia ▴ 110
1
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1
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1.9k
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Comment: Comment: BULK mRNA-seq with UMIs. Do I need to normalize by gene length?
14 months ago by txema.heredia ▴ 110
16
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7
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1.9k
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BULK mRNA-seq with UMIs. Do I need to normalize by gene length?
mRNA UMI normalization illumina DESeq2
updated 14 months ago by 4.5k • written 14 months ago by ▴ 110
0
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0
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1.9k
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Comment: Comment: BULK mRNA-seq with UMIs. Do I need to normalize by gene length?
14 months ago by txema.heredia ▴ 110
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1
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1.4k
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Comment: C: Retrieving individual cells from scRNA-seq bigWig files?
4.0 years ago by txema.heredia ▴ 110
2
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4
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1.4k
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Retrieving individual cells from scRNA-seq bigWig files?
single cell RNA-Seq scRNA-seq bigwig
updated 4.0 years ago by 12k • written 4.0 years ago by ▴ 110
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