User: nayeona.hi

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nayeona.hi30
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Posts by nayeona.hi

<prev • 5 results • page 1 of 1 • next >
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how to count the numbers of SNPs per sample?
... Hello, this is my first data analysis with PED and MAP file. I started on Plink, first with tutorials. I generated bim, fam and bed files from PED and MAP files, the total number of samples is 6674 and I checked in the fam file. What I wonder is how can I check the SNPs per sample? In the bim ...
bim_file plink snp written 9 weeks ago by nayeona.hi30 • updated 9 weeks ago by Sam3.0k
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Comment: C: how to convert probeID (affy 5.0) to rsID?
... Thank you for your help! ...
written 10 weeks ago by nayeona.hi30
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how to convert probeID (affy 5.0) to rsID?
... I got SNP lists by probeID such as SNP_A-4237241 (made from affy 5.0) and it seems there are no rsID contained. How can I convert these to rsID? or converting gene symbol would be more useful? (and still how?) Thank you in advance. ...
affy5.0 snp rsid written 10 weeks ago by nayeona.hi30 • updated 10 weeks ago by Kevin Blighe61k
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Answer: A: Is there any online course for bioinformatics right now or in the next two or th
... https://pickingupthetabb.wordpress.com/building-a-bioinformaticist/free-online-training-in-bioinformatics-and-biostatistics/ ...
written 10 weeks ago by nayeona.hi30
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reading a big file in R
... I am a novice in this field, and this would be silly question. I got PED and MAP file and got a raw file through PLINK (recodeAD) whose size is 8.8 G. It takes so long time to read in R on Ubuntu server. So... are there any ways to check out whether things are going well or split the file? Tha ...
R snp written 11 weeks ago by nayeona.hi30 • updated 11 weeks ago by brunobsouzaa180

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