User: kwanghoon

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kwanghoon0
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Posts by kwanghoon

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Comment: C: HISAT2 alignment problem
... > Use of uninitialized value $read_len_str in string ne at ./hisat2 line > 293. > > 86563369 reads; of these: > > 86563369 (100.00%) were paired; of these: > > 1516202 (1.75%) aligned concordantly 0 times > 55773439 (64.43%) aligned concordantly exactly 1 time & ...
written 25 days ago by kwanghoon0
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Comment: C: HISAT2 alignment problem
... version is python --version Python 3.7.6 ...
written 25 days ago by kwanghoon0
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HISAT2 alignment problem
... I have problems when I run hisat2. my command is ./hisat2 -x $HISAT2G/hisat2_hg38 -p 16 -1 /home/sunghyepark_lab/test/test_files/RNA/rawData/trimmed/trimmed_paired_1607370-RNA-T_1.fastq.gz -2 /home/sunghyepark_lab/test/test_files/RNA/rawData/trimmed/trimmed_paired_1607370-RNA-T_2.fastq.gz -S / ...
rna-seq hisat2 written 28 days ago by kwanghoon0 • updated 5 days ago by geneticatt0

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