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Comment: Comment: Normalizing Peaks in ChIP seq
4 months ago by mropri ▴ 170
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1.0k
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Comment: Comment: Calculating percentage of cells proliferating in single cell rna seq data
11 months ago by mropri ▴ 170
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1.7k
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Comment: Comment: Before doing pseudobulk, should we get rid of genes that are only expressed in a
12 months ago by mropri ▴ 170
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1
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1.7k
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Comment: Comment: Before doing pseudobulk, should we get rid of genes that are only expressed in a
12 months ago by mropri ▴ 170
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0
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1.7k
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Comment: Comment: Before doing pseudobulk, should we get rid of genes that are only expressed in a
12 months ago by mropri ▴ 170
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1
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1.7k
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Comment: Comment: Before doing pseudobulk, should we get rid of genes that are only expressed in a
12 months ago by mropri ▴ 170
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1.7k
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Comment: Comment: How to account for total number of cells when aggregating for pseudobulk?
12 months ago by mropri ▴ 170
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1.7k
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Comment: Comment: How to account for total number of cells when aggregating for pseudobulk?
12 months ago by mropri ▴ 170
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1.4k
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Comment: Comment: Why does DESeq2 give negative log2 fold change in treatment vs control for some
12 months ago by mropri ▴ 170
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1.1k
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Comment: Comment: Error in checkFullRank(modelMatrix) : the model matrix is not full rank, so t
14 months ago by mropri ▴ 170
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1.1k
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Comment: Comment: Error in checkFullRank(modelMatrix) : the model matrix is not full rank, so t
updated 14 months ago by 152k • written 14 months ago by ▴ 170
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978
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Comment: Comment: Wilcox test using data slot (log normalized count values) of scRNA-seq between t
14 months ago by mropri ▴ 170
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1
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1.0k
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Comment: Comment: Calculating percentage of cells proliferating in single cell rna seq data
15 months ago by mropri ▴ 170
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1
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2.0k
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Comment: Comment: Is it necessary to integrate again samples when subclustering
18 months ago by mropri ▴ 170
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1.6k
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Comment: Comment: Single Cell RNA-seq analysis one by one vs all together
18 months ago by mropri ▴ 170
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1.8k
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Comment: Comment: BAMboozle
2.2 years ago by mropri ▴ 170
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1.4k
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Comment: Comment: Picard ribosome intervals list
2.2 years ago by mropri ▴ 170
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1
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1.8k
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Comment: Comment: BAMboozle
2.2 years ago by mropri ▴ 170
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1.8k
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Comment: Comment: BAMboozle
2.2 years ago by mropri ▴ 170
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2
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1.8k
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Comment: Comment: BAMboozle
updated 2.2 years ago by 102k • written 2.2 years ago by ▴ 170
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1
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1.4k
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Comment: Comment: Picard ribosome intervals list
updated 2.2 years ago by 152k • written 2.2 years ago by ▴ 170
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1.9k
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Comment: Comment: Older version of SVA (Surrogate Variable Analysis) in R using Bioconductor?
2.3 years ago by mropri ▴ 170
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1.9k
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Comment: Comment: I am trying to get an older version of SVA (Surrogate Variable Analysis) in R us
2.3 years ago by mropri ▴ 170
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867
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Comment: Comment: Power analysis for patient samples
2.3 years ago by mropri ▴ 170
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2.2k
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Comment: Comment: Use single cell sequencing bam file to tell if a patient has a mutation
2.4 years ago by mropri ▴ 170
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2.2k
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Comment: Comment: Use single cell sequencing bam file to tell if a patient has a mutation
2.4 years ago by mropri ▴ 170
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1
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2.2k
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Comment: Comment: Use single cell sequencing bam file to tell if a patient has a mutation
2.4 years ago by mropri ▴ 170
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1.3k
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Comment: Comment: GO analysis where I can set by own set of genes to search against
2.8 years ago by mropri ▴ 170
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1.3k
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Comment: Comment: GO analysis where I can set by own set of genes to search against
2.8 years ago by mropri ▴ 170
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2
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1.3k
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Comment: Comment: GO analysis where I can set by own set of genes to search against
2.8 years ago by mropri ▴ 170
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3.5k
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Comment: Comment: Creating a script to run STAR alignment on multiple fastq files
3.1 years ago by mropri ▴ 170
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3.5k
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Comment: Comment: Creating a script to run STAR alignment on multiple fastq files
3.1 years ago by mropri ▴ 170
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1.9k
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Comment: Comment: Sabre demultiplexer
3.1 years ago by mropri ▴ 170
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1.9k
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Comment: Comment: Sabre demultiplexer
3.1 years ago by mropri ▴ 170
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3.1k
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Comment: Comment: Corrplot heatmap crunched up and unreadable
3.1 years ago by mropri ▴ 170
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3.1k
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Comment: Comment: Corrplot heatmap crunched up and unreadable
3.1 years ago by mropri ▴ 170
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1
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3.1k
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Comment: Comment: Corrplot heatmap crunched up and unreadable
updated 3.1 years ago by 45k • written 3.1 years ago by ▴ 170
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1
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3.1k
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Comment: Comment: Corrplot heatmap crunched up and unreadable
3.1 years ago by mropri ▴ 170
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1
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3.1k
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Comment: Comment: Corrplot heatmap crunched up and unreadable
updated 3.1 years ago by 45k • written 3.1 years ago by ▴ 170
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1
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3.1k
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Comment: Comment: Corrplot heatmap crunched up and unreadable
updated 3.1 years ago by 45k • written 3.1 years ago by ▴ 170
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1
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3.1k
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Comment: Comment: Corrplot heatmap crunched up and unreadable
3.1 years ago by mropri ▴ 170
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1.0k
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Comment: Comment: Create a heatmap of only significant correlations
3.1 years ago by mropri ▴ 170
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936
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Comment: Comment: Filter Protein Expression Data
3.1 years ago by mropri ▴ 170
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1.1k
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Comment: Comment: Impute protein expression matrix
3.1 years ago by mropri ▴ 170
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5.1k
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Comment: Comment: How to regress out age and sex using limma removeBatchEffect
3.2 years ago by mropri ▴ 170
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5.1k
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Comment: Comment: How to regress out age and sex using limma removeBatchEffect
3.2 years ago by mropri ▴ 170
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0
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5.1k
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Comment: Comment: How to regress out age and sex using limma removeBatchEffect
3.2 years ago by mropri ▴ 170
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1
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5.1k
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Comment: Comment: How to regress out age and sex using limma removeBatchEffect
3.2 years ago by mropri ▴ 170
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1
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5.1k
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Comment: Comment: How to regress out age and sex using limma removeBatchEffect
3.2 years ago by mropri ▴ 170
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1
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2.7k
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Comment: Comment: bedGraphToBigWig
4.2 years ago by mropri ▴ 170
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