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Comment: Comment: Question: Is there a way to reformat vcf 4.3 down to 4.2?
4 months ago by Ömer An ▴ 270
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2.9k
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Comment: Comment: counting number of CpGs that are methylated and unmethylated in a read of whole
7 months ago by Ömer An ▴ 270
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2.8k
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Comment: Comment: fusion detection for DNA Sequencing data
7 months ago by Ömer An ▴ 270
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1.8k
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Comment: Comment: cnvkit Error message "length of weights should be the same as the number of prob
8 months ago by Ömer An ▴ 270
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15k
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Comment: Comment: MAF vs VAF
13 months ago by Ömer An ▴ 270
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59k
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Comment: Comment: How to extract sample id using bcftools or vcftools
3.7 years ago by Ömer An ▴ 270
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36k
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Comment: C: Batch correction in DESeq2
4.4 years ago by Ömer An ▴ 270
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114k
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Comment: C: How to plot coverage and depth statistics of a bam file
4.6 years ago by Ömer An ▴ 270
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5.9k
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Comment: C: CellRanger Make Counts Expected Cells
4.7 years ago by Ömer An ▴ 270
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12k
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Comment: C: correcting for a batch in DESeq2
4.8 years ago by Ömer An ▴ 270
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13k
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Comment: C: STAR or Bowtie for small RNA seq?
5.0 years ago by Ömer An ▴ 270
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5.2k
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Comment: C: best STAR options for miRNA mapping?
5.0 years ago by Ömer An ▴ 270
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Comment: C: Cellranger count fails at mapping
5.0 years ago by Ömer An ▴ 270
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15k
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Comment: C: How to download mm10 GTF file with the gene id and gene name using UCSC table br
5.2 years ago by Ömer An ▴ 270
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1
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5.8k
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Comment: A: How to analyze the RNAseq paired samples with DESeq2?
5.3 years ago by Ömer An ▴ 270
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1.6k
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Comment: C: Find 12-mer not mapping to the human genome
5.5 years ago by Ömer An ▴ 270
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11k
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Comment: C: input for rMATS
5.9 years ago by Ömer An ▴ 270
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11k
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Comment: C: input for rMATS
5.9 years ago by Ömer An ▴ 270
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1
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11k
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Comment: C: input for rMATS
5.9 years ago by Ömer An ▴ 270
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16k
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Comment: C: How many genes to include for a GSEA analysis
5.9 years ago by Ömer An ▴ 270
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1
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4.0k
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Comment: C: DESeq2: unable to allocate memory error
6.0 years ago by Ömer An ▴ 270
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5.4k
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Comment: C: Getting error in running rMATS
6.4 years ago by Ömer An ▴ 270
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9.5k
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Comment: Comment: Splicing factor database
updated 2.6 years ago by 45k • written 6.6 years ago by ▴ 270
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77k
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Comment: C: VCF files: Change Chromosome Notation
6.7 years ago by Ömer An ▴ 270
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70k
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Comment: C: How To Convert Gencode Gtf Into Bed Format ?
7.0 years ago by Ömer An ▴ 270
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25k
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Comment: C: Bwa Mem Method For Mapping, With Or Without Trimming Reads?
7.2 years ago by Ömer An ▴ 270
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5.5k
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Comment: C: Script for analyzing idat (illumina) microarray files with limma, any suggestion
7.3 years ago by Ömer An ▴ 270
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5.5k
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Comment: C: Script for analyzing idat (illumina) microarray files with limma, any suggestion
7.3 years ago by Ömer An ▴ 270
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57k
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Comment: C: How To Download All Sra Samples At Once ?
7.7 years ago by Ömer An ▴ 270
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31k
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Comment: C: Extract Sequence From Fasta File Using Ids From A Separate File
8.0 years ago by Ömer An ▴ 270
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16k
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Comment: C: FastQ quality check : what can we correct ?
8.4 years ago by Ömer An ▴ 270
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11k
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Comment: C: Paired End Trimmomatic producing asymmetric paired read files.
8.7 years ago by Ömer An ▴ 270
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107k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
8.9 years ago by Ömer An ▴ 270
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1
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3.9k
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Comment: C: How to identify non-expressed genes in microarray?
9.6 years ago by Ömer An ▴ 270
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1
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2.3k
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Comment: C: Is there a repository for data on shRNA screening studies?
9.6 years ago by Ömer An ▴ 270
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11k
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Comment: Comment: What Happened To The Bind (Biological Interaction Network) Database And Is Acces
updated 2.4 years ago by 45k • written 9.9 years ago by ▴ 270
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3.3k
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Comment: Comment: Mapping DIP-id to common name[Python]
updated 3.1 years ago by 45k • written 9.9 years ago by ▴ 270
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12k
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Comment: Comment: TCGA CNV Files
updated 3.3 years ago by 45k • written 10.1 years ago by ▴ 270
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1
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4.0k
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Comment: Comment: Postdoc in bioinformatics – Department of Molecular Oncology
updated 3.1 years ago by 45k • written 10.1 years ago by ▴ 270
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2.1k
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Comment: Comment: Where do I get a list of ohnologs from this published paper?
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 270
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1
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5.2k
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Comment: C: How To Call Loss / Gain On Cgh Data When Tumor And Normal Are Not Analysed Toget
12.3 years ago by Ömer An ▴ 270
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