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Comment: Comment: How to extract sample id using bcftools or vcftools
2.2 years ago by Ömer An ▴ 260
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23k
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Comment: C: Batch correction in DESeq2
2.8 years ago by Ömer An ▴ 260
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94k
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Comment: C: How to plot coverage and depth statistics of a bam file
3.1 years ago by Ömer An ▴ 260
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4.3k
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Comment: C: CellRanger Make Counts Expected Cells
3.1 years ago by Ömer An ▴ 260
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11k
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Comment: C: correcting for a batch in DESeq2
3.2 years ago by Ömer An ▴ 260
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10k
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Comment: C: STAR or Bowtie for small RNA seq?
3.4 years ago by Ömer An ▴ 260
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4.4k
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Comment: C: best STAR options for miRNA mapping?
3.4 years ago by Ömer An ▴ 260
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4.8k
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Comment: C: Cellranger count fails at mapping
3.4 years ago by Ömer An ▴ 260
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1
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12k
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Comment: C: How to download mm10 GTF file with the gene id and gene name using UCSC table br
3.6 years ago by Ömer An ▴ 260
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1
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3.8k
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Comment: A: How to analyze the RNAseq paired samples with DESeq2?
3.7 years ago by Ömer An ▴ 260
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1.1k
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Comment: C: Find 12-mer not mapping to the human genome
3.9 years ago by Ömer An ▴ 260
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8.1k
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Comment: C: input for rMATS
4.3 years ago by Ömer An ▴ 260
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8.1k
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Comment: C: input for rMATS
4.3 years ago by Ömer An ▴ 260
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8.1k
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Comment: C: input for rMATS
4.3 years ago by Ömer An ▴ 260
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9.9k
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Comment: C: How many genes to include for a GSEA analysis
4.3 years ago by Ömer An ▴ 260
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1
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2.9k
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Comment: C: DESeq2: unable to allocate memory error
4.5 years ago by Ömer An ▴ 260
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4.5k
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Comment: C: Getting error in running rMATS
4.8 years ago by Ömer An ▴ 260
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8.3k
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Comment: Comment: Splicing factor database
updated 12 months ago by 40k • written 5.0 years ago by ▴ 260
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59k
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Comment: C: VCF files: Change Chromosome Notation
5.1 years ago by Ömer An ▴ 260
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2
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60k
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Comment: C: How To Convert Gencode Gtf Into Bed Format ?
5.4 years ago by Ömer An ▴ 260
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22k
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Comment: C: Bwa Mem Method For Mapping, With Or Without Trimming Reads?
5.6 years ago by Ömer An ▴ 260
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4.5k
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Comment: C: Script for analyzing idat (illumina) microarray files with limma, any suggestion
5.7 years ago by Ömer An ▴ 260
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1
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4.5k
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Comment: C: Script for analyzing idat (illumina) microarray files with limma, any suggestion
5.7 years ago by Ömer An ▴ 260
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52k
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Comment: C: How To Download All Sra Samples At Once ?
6.1 years ago by Ömer An ▴ 260
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29k
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Comment: C: Extract Sequence From Fasta File Using Ids From A Separate File
6.4 years ago by Ömer An ▴ 260
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15k
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Comment: C: FastQ quality check : what can we correct ?
6.8 years ago by Ömer An ▴ 260
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9.7k
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Comment: C: Paired End Trimmomatic producing asymmetric paired read files.
7.1 years ago by Ömer An ▴ 260
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88k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
7.3 years ago by Ömer An ▴ 260
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1
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3.3k
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Comment: C: How to identify non-expressed genes in microarray?
8.0 years ago by Ömer An ▴ 260
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1
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1.9k
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Comment: C: Is there a repository for data on shRNA screening studies?
8.0 years ago by Ömer An ▴ 260
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9.0k
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Comment: Comment: What Happened To The Bind (Biological Interaction Network) Database And Is Acces
updated 9 months ago by 40k • written 8.3 years ago by ▴ 260
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2.8k
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Comment: Comment: Mapping DIP-id to common name[Python]
updated 17 months ago by 40k • written 8.3 years ago by ▴ 260
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11k
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Comment: Comment: TCGA CNV Files
updated 21 months ago by 40k • written 8.5 years ago by ▴ 260
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1
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3.5k
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Comment: Comment: Postdoc in bioinformatics – Department of Molecular Oncology
updated 17 months ago by 40k • written 8.5 years ago by ▴ 260
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1.6k
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Comment: Comment: Where do I get a list of ohnologs from this published paper?
updated 17 months ago by 40k • written 8.6 years ago by ▴ 260
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1
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4.4k
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Comment: C: How To Call Loss / Gain On Cgh Data When Tumor And Normal Are Not Analysed Toget
10.7 years ago by Ömer An ▴ 260
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