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Posts by alexgongfy
... This is normal and has no effect on the results。 A tile is a small square in a lane of Illumina, and there are many sequencing clusters in a tile. This hint means that there are too many tiles in the data, and the quality distribution of each tile is not included in the analysis results. ...
... library(WGCNA) rpkm=read.table("WGCNA/WS1",header=TRUE,sep = "\t") dim(rpkm) names() datExpr0 = as.data.frame(t(rpkm[, -1])) names(datExpr0) = rpkm$ID rownames(datExpr0) = names(rpkm)[-1] gsg = goodSamplesGenes(datExpr0, verbose = 3) gsg$allOK sep = "\t" maybe the r ...
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