User: ellieuk

gravatar for ellieuk
ellieuk0
Reputation:
0
Status:
New User
Last seen:
1 day, 3 hours ago
Joined:
2 days, 17 hours ago
Email:
e******@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by ellieuk

<prev • 3 results • page 1 of 1 • next >
0
votes
0
answers
47
views
0
answers
Comment: C: Phasing a trio in multi-sample vcf with zygosity
... I want to be able to filter for all! We don’t know. It could be de novo, dominant and with incomplete penetrance, recessive, X linked etc. The idea is that I can filter for all inheritance patterns if I have the ref/het/hom for all individuals simply laid out in one single annotated file. ...
written 1 day ago by ellieuk0
0
votes
0
answers
47
views
0
answers
Comment: C: Phasing a trio in multi-sample vcf with zygosity
... Hi Pierre, I’m trying to get an annotated annovar file that includes all samples (mum, dad, and proband) but instead of having the genotypes as 1/1, 1/0, 0/0 etc, I would like 3 columns for mum, dad, and proband in the same file but with het, hom or ref. Currently annovar allows you to print zygosi ...
written 1 day ago by ellieuk0
0
votes
0
answers
47
views
0
answers
Phasing a trio in multi-sample vcf with zygosity
... Hi there, I'd be grateful for some help please. I've got several joint-called trio VCFs (unaffected parents and proband) which I'm analysing. The multi-sample vcf nicely shows 0/0, 0/1, 1/1 for each individual per variant. However, I'd like to convert the notation to three columns of simply het, h ...
genome written 2 days ago by ellieuk0

Latest awards to ellieuk

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1438 users visited in the last hour