User: Damon_Wan

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Damon_Wan0
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Posts by Damon_Wan

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Comment: C: How to get a genome decontaminated after assemble
... Thank you very much! ...
written 4 weeks ago by Damon_Wan0
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Comment: C: How to get a genome decontaminated after assemble
... Thank you for answering! I think I will find some papers and protocols and have a try in this way. Do you have some recommended parpers or other article, by the way. ...
written 4 weeks ago by Damon_Wan0
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Comment: C: How to get a genome decontaminated after assemble
... Thank you for answering! As I rechecked the workflow of CLC, turns out that no reference was used. It is a *de novo* assembly without references. The genome I want to assemble is a kind of protozoon. The data was produced by Illumina Hiseq 2500, so I think there must be some contamination of bacter ...
written 4 weeks ago by Damon_Wan0
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How to get a genome decontaminated after assemble
... Hello everyone, I am a rookie just start learning bioinformatics, and I have a question. Now I have a fasta file that reads were assembled into contigs by CLC workbench and the same specie reference genome files. I want to know how could I filtrate the fasta file to get a decontaminated clean genom ...
genome assembly written 4 weeks ago by Damon_Wan0 • updated 4 weeks ago by h.mon30k

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