User: draven.a.rane

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Posts by draven.a.rane

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Comment: C: Error in DESeqDataSet(se, design = design, ignoreRank) : variables in design
... I can see that. However, I do not understand what I am doing wrong. If you understand the error I am making it would be nice if you could share it rather than stating what R has already told me and what I have already tried to fix on my own. ...
written 27 days ago by draven.a.rane0
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Comment: C: Error in DESeqDataSet(se, design = design, ignoreRank) : variables in design
... Yes, I understand the data isn't good enough for normal DESeq2 analysis. My task is only to recapitulate the findings of the study that published this data. It's supposed to be kind of a test run for my first time doing DESeq2 that my post-doc gave me. So, any help with this would help me understand ...
written 27 days ago by draven.a.rane0
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Error in DESeqDataSet(se, design = design, ignoreRank) : variables in design formula cannot contain NA:
... Hello, I am new to R and DESeq2 and have been experiencing problems with inputting raw data and creating the metadata to construct a valid dds. Here is my code: # DESeq2 Analysis # Load in libraries library(tidyverse) library(DESeq2) library(RColorBrewer) library( ...
rna-seq written 27 days ago by draven.a.rane0 • updated 27 days ago by swbarnes28.1k

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