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questions
1
vote
2
replies
369
views
locuszoom error
locuszoom
4 months ago by
nanodano
▴ 30
0
votes
0
replies
293
views
beagle to gds for admixture mapping
admixture
genesis
gwastools
gds
beagle
5 months ago by
nanodano
▴ 30
9
votes
4
replies
2.4k
views
Picard LiftOver rejecting all Variants
hg19
picard
liftover
updated 16 months ago by
Giulio Genovese
▴ 390 • written 16 months ago by
nanodano
▴ 30
1
vote
3
replies
708
views
Where to find vcf of dbsnp build 144 ?
vcf
dbsnp
snp144
annotation
updated 17 months ago by
Ram
43k • written 17 months ago by
nanodano
▴ 30
0
votes
2
replies
809
views
Problematic mismatch ref alleles when Annotate VCF file
vcf
bcftools
vcftools
updated 10 months ago by
Ram
43k • written 17 months ago by
nanodano
▴ 30
0
votes
1
reply
833
views
Understanding Phasing with ShapeIt
reference
phasing
shapeit2
shapeit
phase
17 months ago by
nanodano
▴ 30
0
votes
2
replies
551
views
chisq.test usage and output interpretation
categorical
chisq.test
variables
chi
R
updated 18 months ago by
Matthias Zepper
4.5k • written 18 months ago by
nanodano
▴ 30
0
votes
0
replies
450
views
Modifying an ADMIXTURE plot
admixture
pong
19 months ago by
nanodano
▴ 30
0
votes
0
replies
332
views
Trouble with inferring genetic relation using KING
ibs
ibd
relatives
king
genetic
19 months ago by
nanodano
▴ 30
7
votes
3
replies
1.3k
views
Is there a way to convert a .vcf.gz.tbi file back to a .vcf.gz or .vcf file?
vcf
plink
bcftools
vcftools
updated 10 months ago by
Ram
43k • written 20 months ago by
nanodano
▴ 30
1
vote
1
reply
475
views
How to identify the genome build a dataset was aligned too?
grch
ucsc
hapmap
genome
build
updated 21 months ago by
mark.ziemann
★ 1.9k • written 21 months ago by
nanodano
▴ 30
0
votes
0
replies
356
views
Convert Recombination txt file to Plink format
plink
recombination
map
genetic
21 months ago by
nanodano
▴ 30
0
votes
1
reply
984
views
Removing extra chromosomes from data
reference
genome
chr
filter
extra
updated 2.3 years ago by
cpad0112
21k • written 2.3 years ago by
nanodano
▴ 30
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