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0
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322
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How to get relative abundance of the features obtained from mass spectrometry from their respective intensity values?
spectrometry mass
17 months ago by deep771992chanda ▴ 40
1
vote
4
replies
1.5k
views
How to retrieve KO IDs for a list of genes?
KEGG database
updated 2.6 years ago by ★ 1.5k • written 2.7 years ago by ▴ 40
2
votes
5
replies
1.9k
views
Difference between KO and ko numbers?
pathway
updated 2.9 years ago by 3.6k • written 2.9 years ago by ▴ 40
2
votes
1
reply
626
views
Can anyone please tell me whether I should go for multivariable analysis with my data in this condition?
statistics multivariate
updated 2.9 years ago by ▴ 160 • written 2.9 years ago by ▴ 40
0
votes
0
replies
717
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How to decide between standardized mean difference (SMD) and log2fold change (log2FC) before doing meta-analysis?
standardisedmeandifference smd metaanalysis
2.9 years ago by deep771992chanda ▴ 40
2
votes
3
replies
957
views
How to get metadata of the metagenomic samples stored in HMP portal?
sequencing sequence
updated 3.3 years ago by 141k • written 3.3 years ago by ▴ 40
4
votes
2
replies
2.8k
views
How to transform my proportional (relative abundance) microbiome data before for statistical analysis?
R
3.3 years ago by deep771992chanda ▴ 40
5
votes
11
replies
2.0k
views
Should I do P-value adjustment in this case?
statistics fdr
written 3.4 years ago by ▴ 40
7
votes
7
replies
1.7k
views
Problem in understanding False Discovery Rate (FDR)
statistics FDR
3.4 years ago by deep771992chanda ▴ 40
0
votes
3
replies
1.3k
views
How to remove low abundance and less prevalent data from my dataset?
metagenome bash
3.4 years ago by deep771992chanda ▴ 40
0
votes
0
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733
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LEFSE: Should I remove features with low relative abundance or lefse will take care of it?
lefse
3.5 years ago by deep771992chanda ▴ 40
0
votes
0
replies
685
views
What effect size value should I use for differential abundance of microbiome taxa?
statistics effect size differetial abundance
3.5 years ago by deep771992chanda ▴ 40
2
votes
9
replies
4.6k
views
How to multiply all columns of a .csv table with a constant extracted from another table?
bash
written 3.5 years ago by ▴ 40
1
vote
8
replies
910
views
How to extract out specific information from files within a directory?
python grep regex
updated 3.5 years ago by 11k • written 3.5 years ago by ▴ 40
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