User: alicelouiseflint

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Posts by alicelouiseflint

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Comment: C: RNAseq analysis of interspecies hybrid
... Thanks, that's a great help ...
written 6 weeks ago by alicelouiseflint0
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Comment: C: RNAseq analysis of interspecies hybrid
... How would I label them and prevent matching IDs? Additionally, how would I go about counting reads as some will presumably map to both genomes and as they will be considered multimapping, will not be counted (I know there are tools for counting multimapping reads but I've read that this can cause pr ...
written 6 weeks ago by alicelouiseflint0
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Comment: C: RNAseq analysis of interspecies hybrid
... Thanks. How do I merge the two files (I'm very new to all this)? ...
written 6 weeks ago by alicelouiseflint0
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RNAseq analysis of interspecies hybrid
... I have two chilli pepper lines that I'm comparing over a range of conditions. However, one of those lines is an interspecies hybrid. I'm wondering how is best to proceed with aligning my reads. Genomes are available for both the species - Capsicum annuum and Capsicum Baccatum so I guess I could alig ...
assembly alignment rna-seq written 6 weeks ago by alicelouiseflint0 • updated 1 day ago by Biostar ♦♦ 20

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