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Answer: Answer: Nextflow and self-made pipelines opinion
7 weeks ago by Jeremy Leipzig 22k
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350
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Answer: Answer: How to reference input variable in output section of rule of Snakemake rule
10 weeks ago by Jeremy Leipzig 22k
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617
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Answer: Answer: difference betwween hail and plink
10 weeks ago by Jeremy Leipzig 22k
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11k
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Answer: Answer: How Much Does It Cost To Align A Flowcell In The Cloud?
11 weeks ago by Jeremy Leipzig 22k
2
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367
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Answer: Answer: Why do these two variants appear to result in the same amino acid change when an
11 weeks ago by Jeremy Leipzig 22k
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531
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Answer: Answer: What tools exist for filtering hundreds of VCFs (and annotated into VCFs in txt
11 weeks ago by Jeremy Leipzig 22k
2
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879
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Answer: Answer: Is it possible to access the code of a bioinformatics article?
12 weeks ago by Jeremy Leipzig 22k
2
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784
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Answer: Answer: Isolating and extracting regions in VCF file
3 months ago by Jeremy Leipzig 22k
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662
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Answer: Answer: GATK GenomicsDBImport too slow
4 months ago by Jeremy Leipzig 22k
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1.7k
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Answer: Answer: How to query 1000 genomes project VCF files for specific regions without downloa
4 months ago by Jeremy Leipzig 22k
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790
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Answer: Answer: Genotypes in vcf files
4 months ago by Jeremy Leipzig 22k
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2.5k
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Answer: Answer: Rust bioinformatics projects ideas
5 months ago by Jeremy Leipzig 22k
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392
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Answer: Answer: Splice junction SNPs
5 months ago by Jeremy Leipzig 22k
1
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558
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Answer: Answer: Finding exons that are always included
5 months ago by Jeremy Leipzig 22k
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696
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Answer: Answer: Calculating ROC50 in R
5 months ago by Jeremy Leipzig 22k
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337
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Answer: Answer: Where can I find links to scientific articles connected to trials referenced in
5 months ago by Jeremy Leipzig 22k
2
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886
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Answer: Answer: Wildcards in Snakemake
6 months ago by Jeremy Leipzig 22k
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926
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Answer: Answer: How long should the AAA... sequence be at the end of read, so that fastqc and mu
6 months ago by Jeremy Leipzig 22k
1
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685
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Answer: Answer: How to find variants in a specific gene in a cohort of 500k+ individuals?
7 months ago by Jeremy Leipzig 22k
3
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1.4k
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Answer: Answer: How to write a review article in bioinformatics
8 months ago by Jeremy Leipzig 22k
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503
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Answer: Answer: Can I say variant called from GIAB confidence region from any sample is real?
9 months ago by Jeremy Leipzig 22k
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1.3k
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Answer: Answer: differential splicing between two groups for 5 genes
10 months ago by Jeremy Leipzig 22k
8
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2
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4.1k
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Answer: Answer: Is there a file format better suited for the era of pangenomics than the .vcf? W
10 months ago by Jeremy Leipzig 22k
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1.2k
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Answer: Answer: Understanding Used Assembly: Why aren't authors specific about patch version?
9 months ago by Jeremy Leipzig 22k
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573
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Answer: Answer: Variant calling in WES vs WGS
11 months ago by Jeremy Leipzig 22k
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686
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Answer: Answer: GRange: Average Metadata Value from 3 Replicates
11 months ago by Jeremy Leipzig 22k
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1.3k
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Answer: Answer: How to efficiently/quickly merge ~500k vcfs?
11 months ago by Jeremy Leipzig 22k
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703
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Answer: Answer: Why is my code only printing the first position?
11 months ago by Jeremy Leipzig 22k
3
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4.2k
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Answer: Answer: I want to correct the erroneous barcode file, and the Python code that I've writ
12 months ago by Jeremy Leipzig 22k
1
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872
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Answer: Answer: Number of allelic depths is larger than number of inferred alleles in VCF file
12 months ago by Jeremy Leipzig 22k
2
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1.0k
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Answer: Answer: Sequencing and assembly of mitochondrial DNA
12 months ago by Jeremy Leipzig 22k
0
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845
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Answer: Answer: What does Z-score and beta value mean in GWAS results?
12 months ago by Jeremy Leipzig 22k
2
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852
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Answer: Answer: SKAT TEST
12 months ago by Jeremy Leipzig 22k
2
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2
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2.0k
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Answer: Answer: What's the general view on point & click bioinformatics for routine analyses?
12 months ago by Jeremy Leipzig 22k
0
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437
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Answer: Answer: Dataset of rare regulatory intronic variants
12 months ago by Jeremy Leipzig 22k
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1
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597
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Answer: Answer: Sample size for population genetics
12 months ago by Jeremy Leipzig 22k
0
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1
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946
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Answer: Answer: GIAB Truth Set
13 months ago by Jeremy Leipzig 22k
0
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0
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664
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Answer: Answer: ChrX allele frequency in males and females
13 months ago by Jeremy Leipzig 22k
3
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2.5k
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Answer: Answer: Rust bioinformatics projects ideas
13 months ago by Jeremy Leipzig 22k
1
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1
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1.2k
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Answer: Answer: What is the general structure of a WDL that implements "embarrassing paralleliza
13 months ago by Jeremy Leipzig 22k
1
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1
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2.1k
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Answer: Answer: How should reference genome fasta files be distributed by UCSC?
14 months ago by Jeremy Leipzig 22k
2
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0
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961
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Answer: Answer: Implementing FAIR data principles to a bioinformatics lab
14 months ago by Jeremy Leipzig 22k
3
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911
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Answer: Answer: What type of database does gnomAD use?
14 months ago by Jeremy Leipzig 22k
0
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620
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Answer: Answer: Snakemake benchmark error
15 months ago by Jeremy Leipzig 22k
1
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0
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1.0k
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Answer: Answer: Find a research paper for reproducing the results
15 months ago by Jeremy Leipzig 22k
2
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1
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833
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Answer: Answer: Heterolasmy and VCF files
15 months ago by Jeremy Leipzig 22k
1
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2
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1.3k
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Answer: Answer: Average number of homozygous SNVs in WGS
15 months ago by Jeremy Leipzig 22k
1
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1
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677
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Answer: Answer: Reference mitochondrial DNA in GRCh37
16 months ago by Jeremy Leipzig 22k
1
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1
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1.0k
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Answer: Answer: Availability of information on genes in Gnomad VCF data
16 months ago by Jeremy Leipzig 22k
1
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0
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1.1k
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Answer: Answer: SNPEff - Exonic Variants
16 months ago by Jeremy Leipzig 22k
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